RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 CTNSO60931 367 aa15.23■□□□□ 0.03
SNAP47-213ENST00000617596 INHBBP09529 407 aa15.23■□□□□ 0.03
SNAP47-213ENST00000617596 ME2P23368 584 aa15.23■□□□□ 0.03
SNAP47-213ENST00000617596 PRKAG1P54619 331 aa15.23■□□□□ 0.03
SNAP47-213ENST00000617596 LIPEQ05469 1076 aa15.23■□□□□ 0.03
SNAP47-213ENST00000617596 SPDYE7PQ495Y7 208 aa15.23■□□□□ 0.03
SNAP47-213ENST00000617596 COX20Q5RI15 118 aa15.23■□□□□ 0.03
SNAP47-213ENST00000617596 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.23■□□□□ 0.03
SNAP47-213ENST00000617596 MLIPQ5VWP3 458 aa15.23■□□□□ 0.03
SNAP47-213ENST00000617596 TMEM53Q6P2H8 277 aa15.23■□□□□ 0.03
SNAP47-213ENST00000617596 FAM111BQ6SJ93 734 aa15.23■□□□□ 0.03
SNAP47-213ENST00000617596 LILRA2Q8N149 483 aa15.23■□□□□ 0.03
SNAP47-213ENST00000617596 PACRGLQ8N7B6 248 aa15.23■□□□□ 0.03
SNAP47-213ENST00000617596 GALNT6Q8NCL4 622 aa15.23■□□□□ 0.03
SNAP47-213ENST00000617596 OR8J3Q8NGG0 315 aa15.23■□□□□ 0.03
SNAP47-213ENST00000617596 TSLPQ969D9 159 aa15.23■□□□□ 0.03
SNAP47-213ENST00000617596 PTCHD1Q96NR3 888 aa15.23■□□□□ 0.03
SNAP47-213ENST00000617596 MESP1Q9BRJ9 268 aa15.23■□□□□ 0.03
SNAP47-213ENST00000617596 ALOXE3Q9BYJ1 711 aa15.23■□□□□ 0.03
SNAP47-213ENST00000617596 SOX17Q9H6I2 414 aaPredicted RBP15.23■□□□□ 0.03
SNAP47-213ENST00000617596 GPATCH2Q9NW75 528 aa15.23■□□□□ 0.03
SNAP47-213ENST00000617596 ZNF282Q9UDV7 671 aaPredicted RBP15.23■□□□□ 0.03
SNAP47-213ENST00000617596 PCDHGB5Q9Y5G0 923 aa15.23■□□□□ 0.03
SNAP47-213ENST00000617596 CCDC187A0A096LP49 1063 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 RNF103-CHMP3A0A140T963 221 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 TMX2-CTNND1H3BSU7 103 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 CNOT3O75175 753 aaKnown RBP15.22■□□□□ 0.03
SNAP47-213ENST00000617596 HBQ1P09105 142 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 CEACAM1P13688 526 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 NT5EP21589 574 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 SOX18P35713 384 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 CHI3L1P36222 383 aaPredicted RBP15.22■□□□□ 0.03
SNAP47-213ENST00000617596 LRRC74AQ0VAA2 488 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 MLC1Q15049 377 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 MOGQ16653 247 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 CEACAM20Q6UY09 585 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 NATD1Q8N6N6 113 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 AMER2Q8N7J2 671 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 HIPK4Q8NE63 616 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 DNAJB8Q8NHS0 232 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 STT3BQ8TCJ2 826 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 EME1Q96AY2 570 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 EFHD2Q96C19 240 aaPredicted RBP15.22■□□□□ 0.03
SNAP47-213ENST00000617596 ISOC1Q96CN7 298 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 FAM120BQ96EK7 910 aaKnown RBP15.22■□□□□ 0.03
SNAP47-213ENST00000617596 KAT8Q9H7Z6 458 aaKnown RBP15.22■□□□□ 0.03
SNAP47-213ENST00000617596 NEUROD4Q9HD90 331 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 IFT80Q9P2H3 777 aaPredicted RBP15.22■□□□□ 0.03
SNAP47-213ENST00000617596 CD300AQ9UGN4 299 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 EGFL7Q9UHF1 273 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 MKL2Q9ULH7 1088 aa15.22■□□□□ 0.03
SNAP47-213ENST00000617596 C9orf172C9J069 976 aa15.21■□□□□ 0.03
SNAP47-213ENST00000617596 NUDT7P0C024 238 aa15.21■□□□□ 0.03
SNAP47-213ENST00000617596 CT62P0C5K7 136 aa15.21■□□□□ 0.03
SNAP47-213ENST00000617596 OCM2P0CE71 109 aa15.21■□□□□ 0.03
SNAP47-213ENST00000617596 OCMP0CE72 109 aaPredicted RBP15.21■□□□□ 0.03
SNAP47-213ENST00000617596 CCT3P49368 545 aaKnown RBP15.21■□□□□ 0.03
SNAP47-213ENST00000617596 GSK3BP49841 420 aa15.21■□□□□ 0.03
SNAP47-213ENST00000617596 MS4A2Q01362 244 aa15.21■□□□□ 0.03
SNAP47-213ENST00000617596 TP53BP2Q13625 1128 aa15.21■□□□□ 0.03
SNAP47-213ENST00000617596 TRMT12Q53H54 448 aaKnown RBP15.21■□□□□ 0.03
SNAP47-213ENST00000617596 FAAH2Q6GMR7 532 aa15.21■□□□□ 0.03
SNAP47-213ENST00000617596 RNF130Q86XS8 419 aa15.21■□□□□ 0.03
SNAP47-213ENST00000617596 OR7G2Q8NG99 324 aa15.21■□□□□ 0.03
SNAP47-213ENST00000617596 ADAMTS18Q8TE60 1221 aa15.21■□□□□ 0.03
SNAP47-213ENST00000617596 OTUB1Q96FW1 271 aaPredicted RBP15.21■□□□□ 0.03
SNAP47-213ENST00000617596 OR1F2PQ96R84 312 aa15.21■□□□□ 0.03
SNAP47-213ENST00000617596 PKP2Q99959 881 aa15.21■□□□□ 0.03
SNAP47-213ENST00000617596 DPH2Q9BQC3 489 aaPredicted RBP15.21■□□□□ 0.03
SNAP47-213ENST00000617596 CHST8Q9H2A9 424 aa15.21■□□□□ 0.03
SNAP47-213ENST00000617596 ALG2Q9H553 416 aa15.21■□□□□ 0.03
SNAP47-213ENST00000617596 MKKSQ9NPJ1 570 aaPredicted RBP15.21■□□□□ 0.03
SNAP47-213ENST00000617596 PRDM9Q9NQV7 894 aa15.21■□□□□ 0.03
SNAP47-213ENST00000617596 C8orf4Q9NR00 106 aa15.21■□□□□ 0.03
SNAP47-213ENST00000617596 FOXJ2Q9P0K8 574 aa15.21■□□□□ 0.03
SNAP47-213ENST00000617596 ACOT8O14734 319 aa15.21■□□□□ 0.02
SNAP47-213ENST00000617596 OR10H2O60403 315 aa15.21■□□□□ 0.02
SNAP47-213ENST00000617596 STK17BO94768 372 aa15.21■□□□□ 0.02
SNAP47-213ENST00000617596 ZGLP1P0C6A0 271 aa15.21■□□□□ 0.02
SNAP47-213ENST00000617596 UQCRC2P22695 453 aa15.21■□□□□ 0.02
SNAP47-213ENST00000617596 S100A1P23297 94 aa15.21■□□□□ 0.02
SNAP47-213ENST00000617596 MVDP53602 400 aa15.21■□□□□ 0.02
SNAP47-213ENST00000617596 HSD17B7P56937 341 aa15.21■□□□□ 0.02
SNAP47-213ENST00000617596 RPS3AP61247 264 aaKnown RBP15.21■□□□□ 0.02
SNAP47-213ENST00000617596 MRPS22P82650 360 aaKnown RBP15.21■□□□□ 0.02
SNAP47-213ENST00000617596 SAMD4BQ5PRF9 694 aaKnown RBP15.21■□□□□ 0.02
SNAP47-213ENST00000617596 PSMA8Q8TAA3 256 aa15.21■□□□□ 0.02
SNAP47-213ENST00000617596 FBXO30Q8TB52 745 aa15.21■□□□□ 0.02
SNAP47-213ENST00000617596 MR1Q95460 341 aa15.21■□□□□ 0.02
SNAP47-213ENST00000617596 ELP4Q96EB1 424 aa15.21■□□□□ 0.02
SNAP47-213ENST00000617596 PLEKHA8Q96JA3 519 aa15.21■□□□□ 0.02
SNAP47-213ENST00000617596 ZNF583Q96ND8 569 aa15.21■□□□□ 0.02
SNAP47-213ENST00000617596 TAAR9Q96RI9 348 aa15.21■□□□□ 0.02
SNAP47-213ENST00000617596 NEURL2Q9BR09 285 aa15.21■□□□□ 0.02
SNAP47-213ENST00000617596 VN1R1Q9GZP7 353 aa15.21■□□□□ 0.02
SNAP47-213ENST00000617596 ZCCHC3Q9NUD5 404 aaKnown RBP15.21■□□□□ 0.02
SNAP47-213ENST00000617596 OLAHQ9NV23 265 aa15.21■□□□□ 0.02
SNAP47-213ENST00000617596 CDV3Q9UKY7 258 aaKnown RBP15.21■□□□□ 0.02
SNAP47-213ENST00000617596 A8MUA0 341 aa15.2■□□□□ 0.02
SNAP47-213ENST00000617596 HRKO00198 91 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms