RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 PRDM14Q9GZV8 571 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 HCFC1R1Q9NWW0 138 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 GIN1Q9NXP7 522 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 ITM2AO43736 263 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 DHRS4L1P0CG22 281 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 ANXA3P12429 323 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 CCNA2P20248 432 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 WDR4P57081 412 aaKnown RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 PPP1CBP62140 327 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 PCBP2Q15366 365 aaKnown RBP eCLIP3.17□□□□□ -1.91e-6■■■■■ 38.2
LPP-220ENST00000617246 FAM74A1Q5RGS3 127 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 WDSUB1Q8N9V3 476 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 FAM173AQ9BQD7 235 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 DUSP15Q9H1R2 295 aaPredicted RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 YAE1D1Q9NRH1 226 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 FGF21Q9NSA1 209 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 B3GNT2Q9NY97 397 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 KLHL42Q9P2K6 505 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 ATG2BQ96BY7 2078 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 ZNF816-ZNF321PA0A0X1KG74 233 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 AGAP5A6NIR3 686 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 DEAF1O75398 565 aaPredicted RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 JRKO75564 520 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 RECQL5O94762 991 aaPredicted RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 LIPAP38571 399 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 ASCL1P50553 236 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 TRAF2Q12933 501 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 HSPB3Q12988 150 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 PARM1Q6UWI2 310 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 LCLAT1Q6UWP7 414 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 ZNF621Q6ZSS3 439 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 GALNTL5Q7Z4T8 443 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 KAT2AQ92830 837 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 MTFMTQ96DP5 389 aaKnown RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 GINS4Q9BRT9 223 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 DCTN5Q9BTE1 182 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 NMUR2Q9GZQ4 415 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 MSRB2Q9Y3D2 182 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 A0A0G2JND7 137 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 L7N2F9 121 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 GABRDO14764 452 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 HCRTR2O43614 444 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 HCN1O60741 890 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 SNAI1O95863 264 aaPredicted RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 UROSP10746 265 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 VAMP2P63027 116 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 SLC10A1Q14973 349 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 SF3A2Q15428 464 aaKnown RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 FAM78AQ5JUQ0 283 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 FRRS1Q6ZNA5 592 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 LINC00301Q8NCQ3 95 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 LPGAT1Q92604 370 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 ITFG2Q969R8 447 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 NTAN1Q96AB6 310 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 SULT4A1Q9BR01 284 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 HDAC8Q9BY41 377 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 ZNF160Q9HCG1 818 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 RASD1Q9Y272 281 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 BTRCQ9Y297 605 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 PKIGQ9Y2B9 76 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 CMAHPQ9Y471 501 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 VWA8A3KMH1 1905 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 SPAARA0A1B0GVQ0 90 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 TMEM120BA0PK00 339 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 LGALS16A8MUM7 142 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 M0R1B8 84 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 RNF13O43567 381 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 OR2T1O43869 369 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 HTRA4P83105 476 aaPredicted RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 CCNI2Q6ZMN8 369 aaPredicted RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 MRGPRGQ86SM5 289 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 SHISA5Q8N114 240 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 SCAMP4Q969E2 229 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 OR5B2Q96R09 309 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 SRA1Q9HD15 236 aaKnown RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 C17orf105B2RV13 164 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 RNPS1Q15287 305 aaKnown RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 GPR157Q5UAW9 335 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 CPNE9Q8IYJ1 553 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 C1orf174Q8IYL3 243 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 ZNF283Q8N7M2 679 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 PROKR2Q8NFJ6 384 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 OR4X2Q8NGF9 303 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 RFKQ969G6 155 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 SLC25A28Q96A46 364 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 KCTD14Q9BQ13 255 aaPredicted RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 GPATCH1Q9BRR8 931 aaKnown RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 SNRNP25Q9BV90 132 aaKnown RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 ELOVL1Q9BW60 279 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 CLK4Q9HAZ1 481 aaKnown RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 PLEKHJ1Q9NW61 149 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 NOP53Q9NZM5 478 aaKnown RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 ZMIZ1Q9ULJ6 1067 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 SNX11Q9Y5W9 270 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 OR6C70A6NIJ9 312 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 COCHO43405 550 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 KITP10721 976 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 EGR1P18146 543 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 EGFLAMQ63HQ2 1017 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 DPPA4Q7L190 304 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms