RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	RAB28	P51157	221 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	BLVRA	P53004	296 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	HOXC5	Q00444	222 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	MLLT1	Q03111	559 aa	Predicted RBP	13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SLC9A5	Q14940	896 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TPRG1L	Q5T0D9	272 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TBC1D3G	Q6DHY5	549 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TBC1D3C	Q6IPX1	549 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SDE2	Q6IQ49	451 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	IQCH	Q86VS3	1027 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	NATD1	Q8N6N6	113 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	AMER2	Q8N7J2	671 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	APOBEC4	Q8WW27	367 aa	Known RBP	13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	MKRN2	Q9H000	416 aa	Known RBP	13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	PCBD2	Q9H0N5	130 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SYNPO2L	Q9H987	977 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	PHPT1	Q9NRX4	125 aa	Predicted RBP	13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	CA5B	Q9Y2D0	317 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390		A0A1W2PQU0	124 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	METTL15	A6NJ78	407 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	PDE9A	O76083	593 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ALOX12	P18054	663 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	PPP2R1B	P30154	601 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	PODNL1	Q6PEZ8	512 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	CYP4Z2P	Q8N1L4	340 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	OR4E2	Q8NGC2	313 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	OR6T1	Q8NGN1	323 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	CREB3L4	Q8TEY5	395 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	KAT2A	Q92830	837 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ZG16B	Q96DA0	208 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ITPKC	Q96DU7	683 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	CDADC1	Q9BWV3	514 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TEX101	Q9BY14	249 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	REV1	Q9UBZ9	1251 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390		A0A1W2PR48	441 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ADAM23	O75077	832 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	FCAR	P24071	287 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	NTS	P30990	170 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	LRRC32	Q14392	662 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TOR1AIP1	Q5JTV8	583 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	MLIP	Q5VWP3	458 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	PLAG1	Q6DJT9	500 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	PGBD2	Q6P3X8	592 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SLC30A8	Q8IWU4	369 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	POC5	Q8NA72	575 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	HPS1	Q92902	700 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	KLHL25	Q9H0H3	589 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ACSL5	Q9ULC5	683 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	RWDD3	Q9Y3V2	267 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390		A0A0A6YYD5	115 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	EFCAB10	A6NFE3	127 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	RGS5	O15539	181 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	PXN	P49023	591 aa	Predicted RBP	13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	EIF2B2	P49770	351 aa	Known RBP	13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	RNF144A	P50876	292 aa	Predicted RBP	13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	PPP5C	P53041	499 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	CLDN2	P57739	230 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	MADCAM1	Q13477	382 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	DBX2	Q6ZNG2	339 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	PLEKHG7	Q6ZR37	379 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	UTS2B	Q765I0	119 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ACOT4	Q8N9L9	421 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	CNRIP1	Q96F85	164 aa	Predicted RBP	13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	MMP27	Q9H306	513 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	DDX31	Q9H8H2	851 aa	Known RBP	13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SLC6A20	Q9NP91	592 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	KCND3	Q9UK17	655 aa		13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	MUC22	E2RYF6	1773 aa	Predicted RBP	13.09	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SMIM30	A4D0T7	59 aa		13.08	□□□□□ -0.31
CACNA1C-231	ENST00000616390	YKT6	O15498	198 aa		13.08	□□□□□ -0.31
CACNA1C-231	ENST00000616390	OR5F1	O95221	314 aa		13.08	□□□□□ -0.31
CACNA1C-231	ENST00000616390	DLGAP3	O95886	979 aa		13.08	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ADA	P00813	363 aa		13.08	□□□□□ -0.31
CACNA1C-231	ENST00000616390	APOD	P05090	189 aa		13.08	□□□□□ -0.31
CACNA1C-231	ENST00000616390	CHRM4	P08173	479 aa		13.08	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TGM1	P22735	817 aa		13.08	□□□□□ -0.31
CACNA1C-231	ENST00000616390	AK4	P27144	223 aa	Predicted RBP	13.08	□□□□□ -0.31
CACNA1C-231	ENST00000616390	RAB15	P59190	212 aa		13.08	□□□□□ -0.31
CACNA1C-231	ENST00000616390	MXD1	Q05195	221 aa		13.08	□□□□□ -0.31
CACNA1C-231	ENST00000616390	MAP4K2	Q12851	820 aa		13.08	□□□□□ -0.31
CACNA1C-231	ENST00000616390	C16orf54	Q6UWD8	224 aa		13.08	□□□□□ -0.31
CACNA1C-231	ENST00000616390	KRT73	Q86Y46	540 aa		13.08	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TMEM203	Q969S6	136 aa		13.08	□□□□□ -0.31
CACNA1C-231	ENST00000616390	RBM18	Q96H35	190 aa	Known RBP	13.08	□□□□□ -0.31
CACNA1C-231	ENST00000616390	A4GNT	Q9UNA3	340 aa		13.08	□□□□□ -0.31
CACNA1C-231	ENST00000616390	GPR52	Q9Y2T5	361 aa		13.08	□□□□□ -0.31
CACNA1C-231	ENST00000616390	DENND4A	Q7Z401	1863 aa		13.08	□□□□□ -0.32
CACNA1C-231	ENST00000616390	CTDSP2	O14595	271 aa		13.08	□□□□□ -0.32
CACNA1C-231	ENST00000616390	CYP7B1	O75881	506 aa		13.08	□□□□□ -0.32
CACNA1C-231	ENST00000616390	CEACAM5	P06731	702 aa		13.08	□□□□□ -0.32
CACNA1C-231	ENST00000616390	PBX2	P40425	430 aa		13.08	□□□□□ -0.32
CACNA1C-231	ENST00000616390	TGM4	P49221	684 aa		13.08	□□□□□ -0.32
CACNA1C-231	ENST00000616390	LTB4R	Q15722	352 aa		13.08	□□□□□ -0.32
CACNA1C-231	ENST00000616390	TMEM31	Q5JXX7	168 aa		13.08	□□□□□ -0.32
CACNA1C-231	ENST00000616390	C9orf50	Q5SZB4	431 aa		13.08	□□□□□ -0.32
CACNA1C-231	ENST00000616390	KCT2	Q8NC54	265 aa		13.08	□□□□□ -0.32
CACNA1C-231	ENST00000616390	MS4A6E	Q96DS6	147 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms