RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 ATP5C1P36542 298 aaKnown RBP2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 FDFT1P37268 417 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 SLC9A3P48764 834 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 PPT1P50897 306 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 RAB9AP51151 201 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 CCNG1P51959 295 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 CTSCP53634 463 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 GSCP56915 257 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 KCNK10P57789 538 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 DAOAP59103 153 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 ARPC4P59998 168 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 B2MP61769 119 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 SNRPEP62304 92 aaKnown RBP2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 TNNC1P63316 161 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 CDK3Q00526 305 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 SLC3A1Q07837 685 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 SLAQ13239 276 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 UAP1Q16222 522 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 CAMK4Q16566 473 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 PCK2Q16822 640 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 HKDC1Q2TB90 917 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 ANKRD55Q3KP44 614 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 ZC2HC1CQ53FD0 456 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 ASPRV1Q53RT3 343 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 WDR38Q5JTN6 314 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 CTSL3PQ5NE16 218 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 PDZK1Q5T2W1 519 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 TMEM198Q66K66 360 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 SLC25A25Q6KCM7 469 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 UGT3A1Q6NUS8 523 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 CYB5D1Q6P9G0 228 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 TTC23LQ6PF05 361 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 CD164L2Q6UWJ8 174 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 FAM159AQ6UWV7 190 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 SYT10Q6XYQ8 523 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 GPR142Q7Z601 462 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 YRDCQ86U90 279 aaKnown RBP2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 CCDC190Q86UF4 302 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 LONP2Q86WA8 852 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 MEX3DQ86XN8 651 aaKnown RBP2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 APLFQ8IW19 511 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 THEM5Q8N1Q8 247 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 AMER3Q8N944 861 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 MINDY2Q8NBR6 621 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 OR5T1Q8NG75 326 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 OR5T3Q8NGG3 340 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 OR4A16Q8NH70 328 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 NDNFQ8TB73 568 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 HMGCLL1Q8TB92 370 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 CHPT1Q8WUD6 406 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 RAB1CQ92928 201 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 TNFRSF14Q92956 283 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 SPDL1Q96EA4 605 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 C4orf36Q96KX1 117 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 SPATA33Q96N06 139 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 FOXN4Q96NZ1 517 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 ALS2CR12Q96Q35 445 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 NPY6RQ99463 290 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 FEVQ99581 238 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 UBAC1Q9BSL1 405 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 CHRDL1Q9BU40 450 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 MRPL13Q9BYD1 178 aaKnown RBP2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 GSDMCQ9BYG8 508 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 SHCBP1LQ9BZQ2 653 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 EGLN1Q9GZT9 426 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 OR52A5Q9H2C5 316 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 RHBGQ9H310 441 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 GEMIN7Q9H840 131 aaKnown RBP2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 ZBTB20Q9HC78 741 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 GPR173Q9NS66 373 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 FKBP14Q9NWM8 211 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 PDP1Q9P0J1 537 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 IFNKQ9P0W0 207 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 HMGXB4Q9UGU5 601 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 BCAP29Q9UHQ4 241 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 CDH9Q9ULB4 789 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 SLC22A14Q9Y267 594 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 PIGLQ9Y2B2 252 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 CLIC4Q9Y696 253 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 PFASO15067 1338 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 ZNF541Q9H0D2 1346 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 DISP3Q9P2K9 1392 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 TRAV25A0A0B4J276 109 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 A0A0G2JNG1 304 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 A0A0U1RRA0 63 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 A0A1B0GUA9 196 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 A0A1B0GUH1 482 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 A0A1W2PQ72 361 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 ANKRD61A6NGH8 418 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 GABRR3A8MPY1 467 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 IQCF5A8MTL0 148 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 PPIAL4DF5H284 164 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 TMEM178BH3BS89 294 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 PDXKO00764 312 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 ABCD4O14678 606 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 PTGESO14684 152 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 STX7O15400 261 aaKnown RBP2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 SSX4O60224 188 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 DFNA5O60443 496 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 CLN5O75503 358 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms