RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 TMEM125Q96AQ2 219 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 ZNF578Q96N58 590 aaPredicted RBP13.15□□□□□ -0.3
CHD1-212ENST00000614616 TMPRSS11EQ9UL52 423 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 TP53P04637 393 aaPredicted RBP13.15□□□□□ -0.3
CHD1-212ENST00000614616 SLC35G6P0C7Q6 338 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 RCAN2Q14206 197 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 CEP68Q76N32 757 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 SOHLH2Q9NX45 425 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 UTS2RQ9UKP6 389 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 FZD7O75084 574 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 SCNN1AP37088 669 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 COL13A1Q5TAT6 717 aaPredicted RBP13.15□□□□□ -0.3
CHD1-212ENST00000614616 C17orf107Q6ZR85 190 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 TMEM150AQ86TG1 271 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 SLC9B2Q86UD5 537 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 OR5D16Q8NGK9 328 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 BRIX1Q8TDN6 353 aaKnown RBP13.15□□□□□ -0.3
CHD1-212ENST00000614616 SMPDL3AQ92484 453 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 SIX4Q9UIU6 781 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 SARDHQ9UL12 918 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 OARD1Q9Y530 152 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 B3GALT2O43825 422 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 ALPIP09923 528 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 RPL10P27635 214 aaKnown RBP13.15□□□□□ -0.3
CHD1-212ENST00000614616 NR0B1P51843 470 aaKnown RBP13.15□□□□□ -0.3
CHD1-212ENST00000614616 OR4D2P58180 307 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 PAFAH1B3Q15102 231 aaKnown RBP13.15□□□□□ -0.3
CHD1-212ENST00000614616 TCTE1Q5JU00 501 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 ZC3H3Q8IXZ2 948 aaKnown RBP13.15□□□□□ -0.3
CHD1-212ENST00000614616 ZNF679Q8IYX0 411 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 RXFP3Q9NSD7 469 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 FNIP2Q9P278 1114 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 GNG13Q9P2W3 67 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 ROBO1Q9Y6N7 1651 aa13.15□□□□□ -0.3
CHD1-212ENST00000614616 ARFGEF1Q9Y6D6 1849 aa13.15□□□□□ -0.31
CHD1-212ENST00000614616 LOC105369274A0A096LPK9 316 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 CDHR4A6H8M9 788 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 GPR89AB7ZAQ6 455 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 C6orf47O95873 294 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 MT-CO2P00403 227 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 GPR89BP0CG08 455 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 PBX2P40425 430 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 RNASE10Q5GAN6 216 aaKnown RBP13.14□□□□□ -0.31
CHD1-212ENST00000614616 CDHR3Q6ZTQ4 885 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 VSIG10LQ86VR7 867 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 BPHLQ86WA6 291 aaPredicted RBP13.14□□□□□ -0.31
CHD1-212ENST00000614616 TMEM173Q86WV6 379 aaPredicted RBP13.14□□□□□ -0.31
CHD1-212ENST00000614616 OR4N4Q8N0Y3 316 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 ESAMQ96AP7 390 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 SORT1Q99523 831 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 NAA50Q9GZZ1 169 aaKnown RBP13.14□□□□□ -0.31
CHD1-212ENST00000614616 LIN7BQ9HAP6 207 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 PIK3C2AO00443 1686 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 HSD3B2P26439 372 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 SPOCK1Q08629 439 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 CHTF18Q8WVB6 975 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 NIPSNAP3BQ9BS92 247 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 DHRS4Q9BTZ2 278 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 SLC22A11Q9NSA0 550 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 SLC22A14Q9Y267 594 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 SPATA31C2B4DYI2 1134 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 TNFRSF10BO14763 440 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 MMP20O60882 483 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 GIPRP48546 466 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 BTG1P62324 171 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 TSSK4Q6SA08 328 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 LYPD4Q6UWN0 246 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 ENPP7Q6UWV6 458 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 RNF180Q86T96 592 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 C1orf52Q8N6N3 182 aaKnown RBP13.14□□□□□ -0.31
CHD1-212ENST00000614616 ZFP41Q8N8Y5 198 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 DCLRE1CQ96SD1 692 aaKnown RBP13.14□□□□□ -0.31
CHD1-212ENST00000614616 STRA6Q9BX79 667 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 BOLA1Q9Y3E2 137 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 ZNF142P52746 1687 aaPredicted RBP13.14□□□□□ -0.31
CHD1-212ENST00000614616 CLDN4O14493 209 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 TGFB1P01137 390 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 PTBP1P26599 531 aaKnown RBP eCLIP13.14□□□□□ -0.31
CHD1-212ENST00000614616 LIPJQ5W064 366 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 SLC22A15Q8IZD6 547 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 SYNPRQ8TBG9 265 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 PSMG2Q969U7 264 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 RAB39BQ96DA2 213 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 FAM83CQ9BQN1 747 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 SPNS1Q9H2V7 528 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 RNF11Q9Y3C5 154 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 A3GALT2U3KPV4 340 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 PXDNQ92626 1479 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 A0A087WZY1 265 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 C7orf72A4D263 438 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 LOC730098B7Z3J9 87 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 HLA-AP01891 365 aaKnown RBP13.14□□□□□ -0.31
CHD1-212ENST00000614616 PTPN2P17706 415 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 CDK3Q00526 305 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 MFSD13AQ14CX5 517 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 TXNRD3NBQ6F5E7 133 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 DNAAF1Q8NEP3 725 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 GSX2Q9BZM3 304 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 KLK4Q9Y5K2 254 aa13.14□□□□□ -0.31
CHD1-212ENST00000614616 HTD2P86397 168 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms