RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 MIEF1Q9NQG6 463 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 MRPS18AQ9NVS2 196 aaKnown RBP10.59□□□□□ -0.71
ATF3-211ENST00000613954 TOR4AQ9NXH8 423 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 TESQ9UGI8 421 aaKnown RBP10.59□□□□□ -0.71
ATF3-211ENST00000613954 ADAM30Q9UKF2 790 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 ACAD8Q9UKU7 415 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 ITM2BQ9Y287 266 aa10.59□□□□□ -0.71
ATF3-211ENST00000613954 PCM1Q15154 2024 aa10.58□□□□□ -0.71
ATF3-211ENST00000613954 FAM240BA0A1B0GVZ2 78 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 OR2AG2A6NM03 316 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 ERVH48-1M5A8F1 160 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 ORC5O43913 435 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 ATG13O75143 517 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 SLC43A1O75387 559 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 MTX2O75431 263 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 EPHX1P07099 455 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 C1GALT1C1LP0DN25 315 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 GAAP10253 952 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 PSKH1P11801 424 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 ADRB3P13945 408 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 GABRA5P31644 462 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 LTBRP36941 435 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 BDKRB1P46663 353 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 MC1RQ01726 317 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 RAB40BQ12829 278 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 TARDBPQ13148 414 aaKnown RBP eCLIP10.58□□□□□ -0.72
ATF3-211ENST00000613954 RIN1Q13671 783 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 SEC23BQ15437 767 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 MZT2AQ6P582 158 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 ZNF765Q7L2R6 523 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 Q8N402 240 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 DEDD2Q8WXF8 326 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 AP2M1Q96CW1 435 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 NEURL3Q96EH8 262 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 C1GALT1C1Q96EU7 318 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 DTD2Q96FN9 168 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 ZNF607Q96SK3 696 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 BEX2Q9BXY8 128 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 SEMA3GQ9NS98 782 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 TVP23BQ9NYZ1 205 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 NDRG2Q9UN36 371 aaKnown RBP10.58□□□□□ -0.72
ATF3-211ENST00000613954 TMA7Q9Y2S6 64 aaKnown RBP10.58□□□□□ -0.72
ATF3-211ENST00000613954 EXOSC1Q9Y3B2 195 aaKnown RBP10.58□□□□□ -0.72
ATF3-211ENST00000613954 ALG5Q9Y673 324 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 SLC5A10A0PJK1 596 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 PIPSLA2A3N6 862 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 NPC1O15118 1278 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 TLX2O43763 284 aaPredicted RBP10.58□□□□□ -0.72
ATF3-211ENST00000613954 NME6O75414 186 aaPredicted RBP10.58□□□□□ -0.72
ATF3-211ENST00000613954 BCHEP06276 602 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 FHP07954 510 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 CLEC2LP0C7M8 214 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 M6PRP20645 277 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 DGKEP52429 567 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 CLDN20P56880 219 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 GPLD1P80108 840 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 CNTN1Q12860 1018 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 FOXD4Q12950 439 aaPredicted RBP10.58□□□□□ -0.72
ATF3-211ENST00000613954 MAB21L1Q13394 359 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 HTR4Q13639 388 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 SLBPQ14493 270 aaKnown RBP eCLIP10.58□□□□□ -0.72
ATF3-211ENST00000613954 ANGPT1Q15389 498 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 SF3A2Q15428 464 aaKnown RBP10.58□□□□□ -0.72
ATF3-211ENST00000613954 TMEM52BQ4KMG9 183 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 CRTC2Q53ET0 693 aaPredicted RBP10.58□□□□□ -0.72
ATF3-211ENST00000613954 FAM46CQ5VWP2 391 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 PAQR6Q6TCH4 344 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 ERN2Q76MJ5 926 aaKnown RBP10.58□□□□□ -0.72
ATF3-211ENST00000613954 CCDC28AQ8IWP9 274 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 FAM109AQ8N4B1 249 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 SLC38A5Q8WUX1 472 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 SNAPC3Q92966 411 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 SOSTQ9BQB4 213 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 HDAC8Q9BY41 377 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 SLC6A16Q9GZN6 736 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 MKRN2Q9H000 416 aaKnown RBP10.58□□□□□ -0.72
ATF3-211ENST00000613954 TRIM45Q9H8W5 580 aaPredicted RBP10.58□□□□□ -0.72
ATF3-211ENST00000613954 NEUROD4Q9HD90 331 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 FGF20Q9NP95 211 aaPredicted RBP10.58□□□□□ -0.72
ATF3-211ENST00000613954 WDR70Q9NW82 654 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 ZSCAN32Q9NX65 697 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 ASB4Q9Y574 426 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 MTCH2Q9Y6C9 303 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 STON1Q9Y6Q2 735 aa10.58□□□□□ -0.72
ATF3-211ENST00000613954 TCF20Q9UGU0 1960 aaKnown RBP10.57□□□□□ -0.72
ATF3-211ENST00000613954 ANHXE9PGG2 379 aa10.57□□□□□ -0.72
ATF3-211ENST00000613954 SGK494L7N484 410 aa10.57□□□□□ -0.72
ATF3-211ENST00000613954 LYRM1O43325 122 aa10.57□□□□□ -0.72
ATF3-211ENST00000613954 TSPAN6O43657 245 aa10.57□□□□□ -0.72
ATF3-211ENST00000613954 PRKYO43930 277 aa10.57□□□□□ -0.72
ATF3-211ENST00000613954 OR2B3O76000 313 aa10.57□□□□□ -0.72
ATF3-211ENST00000613954 TGFB1P01137 390 aa10.57□□□□□ -0.72
ATF3-211ENST00000613954 ACP2P11117 423 aa10.57□□□□□ -0.72
ATF3-211ENST00000613954 TNNI3P19429 210 aa10.57□□□□□ -0.72
ATF3-211ENST00000613954 GSTM3P21266 225 aa10.57□□□□□ -0.72
ATF3-211ENST00000613954 ETV5P41161 510 aa10.57□□□□□ -0.72
ATF3-211ENST00000613954 TNFRSF4P43489 277 aa10.57□□□□□ -0.72
ATF3-211ENST00000613954 OR3A3P47888 321 aa10.57□□□□□ -0.72
ATF3-211ENST00000613954 KCNJ5P48544 419 aa10.57□□□□□ -0.72
ATF3-211ENST00000613954 INPP1P49441 399 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms