RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 IMP3Q9NV31 184 aaKnown RBP13.85□□□□□ -0.19
CDH1-213ENST00000612417 C5AR2Q9P296 337 aa13.85□□□□□ -0.19
CDH1-213ENST00000612417 A4GNTQ9UNA3 340 aa13.85□□□□□ -0.19
CDH1-213ENST00000612417 GOLGA4Q13439 2230 aaKnown RBP13.84□□□□□ -0.19
CDH1-213ENST00000612417 SH3BP5O60239 455 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 CLEC3AO75596 197 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 TP53P04637 393 aaPredicted RBP13.84□□□□□ -0.19
CDH1-213ENST00000612417 DRD2P14416 443 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 KIAA1024LP59773 190 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 TP53BP2Q13625 1128 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 NFATC4Q14934 902 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 NDUFA9Q16795 377 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 SLC25A30Q5SVS4 291 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 CASP12Q6UXS9 341 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 DEF8Q6ZN54 512 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 SYT13Q7L8C5 426 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 LINC00471Q8N535 108 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 TBC1D19Q8N5T2 526 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 POC5Q8NA72 575 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 FAM83FQ8NEG4 500 aaPredicted RBP13.84□□□□□ -0.19
CDH1-213ENST00000612417 TSTD1Q8NFU3 115 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 SLC7A13Q8TCU3 470 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 TOE1Q96GM8 510 aaKnown RBP13.84□□□□□ -0.19
CDH1-213ENST00000612417 TMEM80Q96HE8 168 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 BMFQ96LC9 184 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 SLC6A18Q96N87 628 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 C6orf106Q9H6K1 298 aaPredicted RBP13.84□□□□□ -0.19
CDH1-213ENST00000612417 SIAEQ9HAT2 523 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 C3orf14Q9HBI5 128 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 C2orf42Q9NWW7 574 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 USP36Q9P275 1121 aaKnown RBP13.84□□□□□ -0.19
CDH1-213ENST00000612417 MRPS17Q9Y2R5 130 aaKnown RBP13.84□□□□□ -0.19
CDH1-213ENST00000612417 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.84□□□□□ -0.19
CDH1-213ENST00000612417 RPL36Q9Y3U8 105 aaKnown RBP13.84□□□□□ -0.19
CDH1-213ENST00000612417 PCDHGB6Q9Y5F9 930 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 PRAMEF27A3QJZ7 478 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 LOC110117498-PIK3R3F6TDL0 507 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 SLC28A2O43868 658 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 KCNJ13O60928 360 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 GPX5O75715 221 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 HOXC4P09017 264 aaPredicted RBP13.84□□□□□ -0.19
CDH1-213ENST00000612417 CSNK1G2P78368 415 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 COX10Q12887 443 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 SPANXN2Q5MJ10 180 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 OR4C11Q6IEV9 310 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 RBM45Q8IUH3 476 aaKnown RBP13.84□□□□□ -0.19
CDH1-213ENST00000612417 DEFB123Q8N688 67 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 LINC01555Q8NAE3 123 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 OR1E3Q8WZA6 343 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 PIK3R3Q92569 461 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 HPS1Q92902 700 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 TSACCQ96A04 125 aaPredicted RBP13.84□□□□□ -0.19
CDH1-213ENST00000612417 SLC35G5Q96KT7 338 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 WDR92Q96MX6 357 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 GUCD1Q96NT3 240 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 OR2M4Q96R27 311 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 MND1Q9BWT6 205 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 CRNNQ9UBG3 495 aaPredicted RBP13.84□□□□□ -0.19
CDH1-213ENST00000612417 SNX11Q9Y5W9 270 aa13.84□□□□□ -0.19
CDH1-213ENST00000612417 OR1F1O43749 312 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 CSO75390 466 aaKnown RBP13.83□□□□□ -0.2
CDH1-213ENST00000612417 UGT2B17O75795 530 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 SOX14O95416 240 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 PPP2R1BP30154 601 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 FEN1P39748 380 aaKnown RBP13.83□□□□□ -0.2
CDH1-213ENST00000612417 TMED10P49755 219 aaKnown RBP13.83□□□□□ -0.2
CDH1-213ENST00000612417 ZNF91Q05481 1191 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 SPHARQ15513 63 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 SYPL1Q16563 259 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 KRT73Q86Y46 540 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 RAB42Q8N4Z0 105 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 TTLQ8NG68 377 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 VANGL1Q8TAA9 524 aaPredicted RBP13.83□□□□□ -0.2
CDH1-213ENST00000612417 CREB3L4Q8TEY5 395 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 AMDHD1Q96NU7 426 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 WFDC6Q9BQY6 131 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 CCDC32Q9BV29 185 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 NUAK2Q9H093 628 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 OR51I1Q9H343 314 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 GLIPR2Q9H4G4 154 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 BCL2L10Q9HD36 194 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 DNAJC27Q9NZQ0 273 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 FAM170BA6NMN3 283 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 H3BN98 237 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 KCNK2O95069 426 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 APBB3O95704 486 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 IGFBP1P08833 259 aaPredicted RBP13.83□□□□□ -0.2
CDH1-213ENST00000612417 OR12D1P0DN82 309 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 SEPHS1P49903 392 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 TARDBPQ13148 414 aaKnown RBP eCLIP13.83□□□□□ -0.2
CDH1-213ENST00000612417 TMEM35AQ53FP2 167 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 TMEM64Q6YI46 380 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 NANOGNBQ7Z5D8 188 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 FAM26EQ8N5C1 309 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 NANOGP1Q8N7R0 232 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 GALNT6Q8NCL4 622 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 PROKR2Q8NFJ6 384 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 BBS10Q8TAM1 723 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 CHAC2Q8WUX2 184 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 HTRA1Q92743 480 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms