RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 SHFQ7M4L6 423 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 GTF2H4Q92759 462 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 PMM1Q92871 262 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 FGF13Q92913 245 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 RFT1Q96AA3 541 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 NECTIN4Q96NY8 510 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 APOOQ9BUR5 198 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 GORASP2Q9H8Y8 452 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 CYP17A1P05093 508 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 CPOXP36551 454 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 BMXP51813 675 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 ALG10BQ5I7T1 473 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 RETREG3Q86VR2 466 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 THRSPQ92748 146 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 PNPLA2Q96AD5 504 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 MACROD1Q9BQ69 325 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 C8orf33Q9H7E9 229 aaPredicted RBP13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 TBCCD1Q9NVR7 557 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 GDE1Q9NZC3 331 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 FXYD6-FXYD2A0A087WZ82 144 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 PEX12O00623 359 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 S1PR1P21453 382 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 GRPRP30550 384 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 HOXC13P31276 330 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 ARHGAP11AQ6P4F7 1023 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 TLDC1Q6P9B6 456 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 KCTD18Q6PI47 426 aaPredicted RBP13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 TMEM151AQ8N4L1 468 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 DTX3Q8N9I9 347 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 OR9A2Q8NGT5 310 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 FNDC8Q8TC99 324 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 MR1Q95460 341 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 SLC41A3Q96GZ6 507 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 FXYD6Q9H0Q3 95 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 DKKL1Q9UK85 242 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 MEMO1Q9Y316 297 aa13.53□□□□□ -0.24
PCDHB16-201ENST00000609684 A0A1W2PPL8 197 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 ANTXRLA6NF34 631 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 SMAD9O15198 467 aaKnown RBP13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 SEMA3DO95025 777 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 AKR1D1P51857 326 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 FAM26DQ5JW98 314 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 TMEM225Q6GV28 225 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 PLBD1Q6P4A8 553 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 NAXEQ8NCW5 288 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 NANSQ9NR45 359 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 B4GAT1O43505 415 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 RLN2P04090 185 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 SLC6A11P48066 632 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 PRLHRP49683 370 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 TRAM1Q15629 374 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 ZNF181Q2M3W8 571 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 ZNF791Q3KP31 576 aaPredicted RBP13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 OR5D16Q8NGK9 328 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 OR2L2Q8NH16 312 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 LKAAEAR1Q8TD35 194 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 TOX2Q96NM4 488 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 WDR83Q9BRX9 315 aaKnown RBP13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 MYNNQ9NPC7 610 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 CA14Q9ULX7 337 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 BAIAP2Q9UQB8 552 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 PCDHGB2Q9Y5G2 931 aa13.52□□□□□ -0.24
PCDHB16-201ENST00000609684 TRAPPC13A5PLN9 417 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 MAN2B1O00754 1011 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 PRLP01236 227 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 Q8N402 240 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 ZDHHC1Q8WTX9 485 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 TMEM41AQ96HV5 264 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 MROQ9BYG7 248 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 SLC6A16Q9GZN6 736 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 DDX60LQ5H9U9 1706 aaKnown RBP13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 SH3PXD2BA1X283 911 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 OR2AT4A6NND4 320 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 EEF1E1O43324 174 aaKnown RBP13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 FRS3O43559 492 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 JRKO75564 520 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 PTGER1P34995 402 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 RABIFP47224 123 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 GDI2P50395 445 aaKnown RBP13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 CLDN2P57739 230 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 SELPLGQ14242 412 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 MAD2L1BPQ15013 274 aaPredicted RBP13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 C1orf94Q6P1W5 598 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 PGM2L1Q6PCE3 622 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 MAVSQ7Z434 540 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 FAM217AQ8IXS0 508 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 ZNF615Q8N8J6 731 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 OR52E2Q8NGJ4 325 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 MS4A4EQ96PG1 132 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 ZNF559Q9BR84 538 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 B3GAT2Q9NPZ5 323 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 FARSAQ9Y285 508 aaKnown RBP13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 HSPB11Q9Y547 144 aa13.52□□□□□ -0.25
PCDHB16-201ENST00000609684 TRBV2A0A0J9YWF9 115 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 LILRB3O75022 631 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 C1orf105O95561 183 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 PRKCAP17252 672 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 P2RY2P41231 377 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 PNCKQ6P2M8 343 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 TMEM173Q86WV6 379 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms