RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 TREX2Q9BQ50 279 aaPredicted RBP21.11■□□□□ 0.97
SHANK2-220ENST00000608988 RHBGQ9H310 441 aa21.11■□□□□ 0.97
SHANK2-220ENST00000608988 RANBP3Q9H6Z4 567 aaPredicted RBP21.11■□□□□ 0.97
SHANK2-220ENST00000608988 EMC7Q9NPA0 242 aa21.11■□□□□ 0.97
SHANK2-220ENST00000608988 SLAMF7Q9NQ25 335 aa21.11■□□□□ 0.97
SHANK2-220ENST00000608988 MAN2C1Q9NTJ4 1040 aa21.11■□□□□ 0.97
SHANK2-220ENST00000608988 KCNN3Q9UGI6 736 aa21.11■□□□□ 0.97
SHANK2-220ENST00000608988 GPSM3Q9Y4H4 160 aa21.11■□□□□ 0.97
SHANK2-220ENST00000608988 AUP1Q9Y679 476 aa21.11■□□□□ 0.97
SHANK2-220ENST00000608988 LEUTXA8MZ59 168 aa21.1■□□□□ 0.97
SHANK2-220ENST00000608988 EFCAB14O75071 495 aa21.1■□□□□ 0.97
SHANK2-220ENST00000608988 PDHA2P29803 388 aa21.1■□□□□ 0.97
SHANK2-220ENST00000608988 SLC6A1P30531 599 aa21.1■□□□□ 0.97
SHANK2-220ENST00000608988 ANXA11P50995 505 aaKnown RBP21.1■□□□□ 0.97
SHANK2-220ENST00000608988 ZNF157P51786 506 aaPredicted RBP21.1■□□□□ 0.97
SHANK2-220ENST00000608988 MAPK12P53778 367 aa21.1■□□□□ 0.97
SHANK2-220ENST00000608988 BDH1Q02338 343 aa21.1■□□□□ 0.97
SHANK2-220ENST00000608988 HSD17B12Q53GQ0 312 aa21.1■□□□□ 0.97
SHANK2-220ENST00000608988 TMEM107Q6UX40 140 aa21.1■□□□□ 0.97
SHANK2-220ENST00000608988 SPERTQ8NA61 448 aa21.1■□□□□ 0.97
SHANK2-220ENST00000608988 TM4SF18Q96CE8 201 aa21.1■□□□□ 0.97
SHANK2-220ENST00000608988 KCTD12Q96CX2 325 aaKnown RBP21.1■□□□□ 0.97
SHANK2-220ENST00000608988 TEX12Q9BXU0 123 aa21.1■□□□□ 0.97
SHANK2-220ENST00000608988 SLC28A3Q9HAS3 691 aa21.1■□□□□ 0.97
SHANK2-220ENST00000608988 MED17Q9NVC6 651 aa21.1■□□□□ 0.97
SHANK2-220ENST00000608988 RNF215Q9Y6U7 377 aa21.1■□□□□ 0.97
SHANK2-220ENST00000608988 ZSCAN5BA6NJL1 495 aa21.09■□□□□ 0.97
SHANK2-220ENST00000608988 ISM1B1AKI9 464 aa21.09■□□□□ 0.97
SHANK2-220ENST00000608988 CASC3O15234 703 aaKnown RBP21.09■□□□□ 0.97
SHANK2-220ENST00000608988 CKMP06732 381 aa21.09■□□□□ 0.97
SHANK2-220ENST00000608988 ZBTB37Q5TC79 503 aa21.09■□□□□ 0.97
SHANK2-220ENST00000608988 OR2A12Q8NGT7 310 aa21.09■□□□□ 0.97
SHANK2-220ENST00000608988 NEIL3Q8TAT5 605 aa21.09■□□□□ 0.97
SHANK2-220ENST00000608988 RAB8BQ92930 207 aa21.09■□□□□ 0.97
SHANK2-220ENST00000608988 ZCCHC2Q9C0B9 1178 aaKnown RBP21.09■□□□□ 0.97
SHANK2-220ENST00000608988 SAP130Q9H0E3 1048 aa21.09■□□□□ 0.97
SHANK2-220ENST00000608988 SPNS1Q9H2V7 528 aa21.09■□□□□ 0.97
SHANK2-220ENST00000608988 RERGLQ9H628 205 aa21.09■□□□□ 0.97
SHANK2-220ENST00000608988 SPG21Q9NZD8 308 aa21.09■□□□□ 0.97
SHANK2-220ENST00000608988 NCKAP1Q9Y2A7 1128 aa21.09■□□□□ 0.97
SHANK2-220ENST00000608988 EXOGQ9Y2C4 368 aaKnown RBP21.09■□□□□ 0.97
SHANK2-220ENST00000608988 TRAV19A0A0A6YYK7 116 aa21.09■□□□□ 0.97
SHANK2-220ENST00000608988 GABRPO00591 440 aa21.09■□□□□ 0.97
SHANK2-220ENST00000608988 TIMP2P16035 220 aa21.09■□□□□ 0.97
SHANK2-220ENST00000608988 ZNF57Q68EA5 555 aaPredicted RBP21.09■□□□□ 0.97
SHANK2-220ENST00000608988 RASSF6Q6ZTQ3 369 aa21.09■□□□□ 0.97
SHANK2-220ENST00000608988 Q6ZVU0 165 aa21.09■□□□□ 0.97
SHANK2-220ENST00000608988 HDDC2Q7Z4H3 204 aa21.09■□□□□ 0.97
SHANK2-220ENST00000608988 SLC35G5Q96KT7 338 aa21.09■□□□□ 0.97
SHANK2-220ENST00000608988 ELF5Q9UKW6 265 aaPredicted RBP21.09■□□□□ 0.97
SHANK2-220ENST00000608988 NUP50Q9UKX7 468 aa21.09■□□□□ 0.97
SHANK2-220ENST00000608988 LIPT1Q9Y234 373 aa21.09■□□□□ 0.97
SHANK2-220ENST00000608988 CASP8AP2Q9UKL3 1982 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 DHFRP00374 187 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 CCT3P49368 545 aaKnown RBP21.08■□□□□ 0.97
SHANK2-220ENST00000608988 TSPAN31Q12999 210 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 TSTA3Q13630 321 aaPredicted RBP21.08■□□□□ 0.97
SHANK2-220ENST00000608988 PRAMEF14Q5SWL7 426 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 PRAMEF8Q5VWM4 474 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 PRAMEF13Q5VWM6 474 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 KHDRBS2Q5VWX1 349 aaKnown RBP21.08■□□□□ 0.97
SHANK2-220ENST00000608988 PRAMEF7Q5VXH5 474 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 GLCCI1Q86VQ1 547 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 AMIGO1Q86WK6 493 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 FAM129CQ86XR2 697 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 KIF18BQ86Y91 864 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 ADGRF3Q8IZF5 1079 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 CMTM8Q8IZV2 173 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 MMP21Q8N119 569 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 LRRC17Q8N6Y2 441 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 RAET1EQ8TD07 263 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 UCN3Q969E3 161 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 SENP5Q96HI0 755 aaPredicted RBP21.08■□□□□ 0.97
SHANK2-220ENST00000608988 PRR14Q9BWN1 585 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 ANKRD19PQ9H560 264 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 C11orf49Q9H6J7 331 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 PELI2Q9HAT8 420 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 GALNT9Q9HCQ5 603 aa21.08■□□□□ 0.97
SHANK2-220ENST00000608988 EIF3KQ9UBQ5 218 aaKnown RBP21.08■□□□□ 0.97
SHANK2-220ENST00000608988 C7orf66A4D0T2 115 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 PLPP1O14494 284 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 IGHA1P01876 353 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 CHRM5P08912 532 aaPredicted RBP21.07■□□□□ 0.96
SHANK2-220ENST00000608988 AVPR1BP47901 424 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 MTNR1BP49286 362 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 KHKP50053 298 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 CAV3P56539 151 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 GPNMBQ14956 572 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 PLA1AQ53H76 456 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 LRRC28Q86X40 367 aaPredicted RBP21.07■□□□□ 0.96
SHANK2-220ENST00000608988 SLC9A6Q92581 669 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 HDHD5Q9BXW7 423 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 RNF32Q9H0A6 362 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 MED28Q9H204 178 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 MALT1Q9UDY8 824 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 ADAM29Q9UKF5 820 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 LOC102723532A0A0G2JNH3 316 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 M0R3H8 397 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 B4GALT2O60909 372 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 NR2F1P10589 423 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms