RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 ZNF395Q9H8N7 513 aaPredicted RBP13.17□□□□□ -0.3
HDDC2-206ENST00000608461 MEAF6Q9HAF1 191 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 SEC14L3Q9UDX4 400 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 BAIAP2L1Q9UHR4 511 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 ATP6V1HQ9UI12 483 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 C19orf53Q9UNZ5 99 aaPredicted RBP13.17□□□□□ -0.3
HDDC2-206ENST00000608461 GPR55Q9Y2T6 319 aaPredicted RBP13.17□□□□□ -0.3
HDDC2-206ENST00000608461 FLNCQ14315 2725 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 FRG2CA6NGY1 282 aa13.16□□□□□ -0.3
HDDC2-206ENST00000608461 ACOT7O00154 380 aa13.16□□□□□ -0.3
HDDC2-206ENST00000608461 SCAMP2O15127 329 aaKnown RBP13.16□□□□□ -0.3
HDDC2-206ENST00000608461 HDAC3O15379 428 aa13.16□□□□□ -0.3
HDDC2-206ENST00000608461 ABCB7O75027 752 aa13.16□□□□□ -0.3
HDDC2-206ENST00000608461 UQCRFS1P47985 274 aa13.16□□□□□ -0.3
HDDC2-206ENST00000608461 ST13P50502 369 aaKnown RBP13.16□□□□□ -0.3
HDDC2-206ENST00000608461 SRSF11Q05519 484 aaKnown RBP13.16□□□□□ -0.3
HDDC2-206ENST00000608461 MRPL49Q13405 166 aaKnown RBP13.16□□□□□ -0.3
HDDC2-206ENST00000608461 PDCD2Q16342 344 aaPredicted RBP13.16□□□□□ -0.3
HDDC2-206ENST00000608461 HYAL4Q2M3T9 481 aa13.16□□□□□ -0.3
HDDC2-206ENST00000608461 TMEM81Q6P7N7 255 aa13.16□□□□□ -0.3
HDDC2-206ENST00000608461 FAM47EQ6ZV65 393 aa13.16□□□□□ -0.3
HDDC2-206ENST00000608461 SIAH3Q8IW03 269 aa13.16□□□□□ -0.3
HDDC2-206ENST00000608461 OR2L13Q8N349 312 aa13.16□□□□□ -0.3
HDDC2-206ENST00000608461 FBXW8Q8N3Y1 598 aa13.16□□□□□ -0.3
HDDC2-206ENST00000608461 CPSF7Q8N684 471 aaKnown RBP13.16□□□□□ -0.3
HDDC2-206ENST00000608461 OR2M7Q8NG81 312 aa13.16□□□□□ -0.3
HDDC2-206ENST00000608461 KAT2AQ92830 837 aa13.16□□□□□ -0.3
HDDC2-206ENST00000608461 ELP4Q96EB1 424 aa13.16□□□□□ -0.3
HDDC2-206ENST00000608461 GPR137Q96N19 417 aa13.16□□□□□ -0.3
HDDC2-206ENST00000608461 NXF5Q9H1B4 397 aaKnown RBP13.16□□□□□ -0.3
HDDC2-206ENST00000608461 AKTIPQ9H8T0 292 aa13.16□□□□□ -0.3
HDDC2-206ENST00000608461 SH3BP4Q9P0V3 963 aa13.16□□□□□ -0.3
HDDC2-206ENST00000608461 NTMQ9P121 344 aa13.16□□□□□ -0.3
HDDC2-206ENST00000608461 CHCHD2Q9Y6H1 151 aaPredicted RBP13.16□□□□□ -0.3
HDDC2-206ENST00000608461 ESPL1Q14674 2120 aa13.16□□□□□ -0.3
HDDC2-206ENST00000608461 AKAP10O43572 662 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 ASNA1O43681 348 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 ERN1O75460 977 aaKnown RBP13.15□□□□□ -0.3
HDDC2-206ENST00000608461 PPM1BO75688 479 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 PSMG1O95456 288 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 LBPP18428 481 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 MST1P26927 711 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 ABCD3P28288 659 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 MANFP55145 182 aaKnown RBP13.15□□□□□ -0.3
HDDC2-206ENST00000608461 CLDN8P56748 225 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 PMP22Q01453 160 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 OCRLQ01968 901 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 DUSP8Q13202 625 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 UBAP2LQ14157 1087 aaKnown RBP13.15□□□□□ -0.3
HDDC2-206ENST00000608461 PRSS53Q2L4Q9 553 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 CPTPQ5TA50 214 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 OGFOD2Q6N063 350 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 PAOXQ6QHF9 649 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 GFRALQ6UXV0 394 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 LARP4Q71RC2 724 aaKnown RBP eCLIP13.15□□□□□ -0.3
HDDC2-206ENST00000608461 NUP54Q7Z3B4 507 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 CAMKMTQ7Z624 323 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 SLC22A16Q86VW1 577 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 RIMKLAQ8IXN7 391 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 SLC34A3Q8N130 599 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 FAM13CQ8NE31 585 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 OR7G2Q8NG99 324 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 CEP70Q8NHQ1 597 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 PRR7Q8TB68 274 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 PIWIL2Q8TC59 973 aaKnown RBP13.15□□□□□ -0.3
HDDC2-206ENST00000608461 ZNF75CPQ92670 426 aaPredicted RBP13.15□□□□□ -0.3
HDDC2-206ENST00000608461 GFM2Q969S9 779 aaKnown RBP13.15□□□□□ -0.3
HDDC2-206ENST00000608461 COQ8BQ96D53 544 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 VSTM2LQ96N03 204 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 ITPAQ9BY32 194 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 IL1RL2Q9HB29 575 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 DDX18Q9NVP1 670 aaKnown RBP13.15□□□□□ -0.3
HDDC2-206ENST00000608461 DTX4Q9Y2E6 619 aa13.15□□□□□ -0.3
HDDC2-206ENST00000608461 OR6C70A6NIJ9 312 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 UPK1AO00322 258 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 TFECO14948 347 aaPredicted RBP13.14□□□□□ -0.31
HDDC2-206ENST00000608461 SOX30O94993 753 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 UNC5CO95185 931 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 SNX4O95219 450 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 LRATO95237 230 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 ABCB1P08183 1280 aaPredicted RBP13.14□□□□□ -0.31
HDDC2-206ENST00000608461 STSP08842 583 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 CT45A8P0DMV1 189 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 CT45A9P0DMV2 189 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 CCL3P10147 92 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 G6PDP11413 515 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 MC3RP41968 323 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 GPR85P60893 370 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 MRPS22P82650 360 aaKnown RBP13.14□□□□□ -0.31
HDDC2-206ENST00000608461 SNTA1Q13424 505 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 PTGR1Q14914 329 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 ZNHIT3Q15649 155 aaPredicted RBP13.14□□□□□ -0.31
HDDC2-206ENST00000608461 EIF2S3LQ2VIR3 472 aaKnown RBP13.14□□□□□ -0.31
HDDC2-206ENST00000608461 LSM12Q3MHD2 195 aaKnown RBP13.14□□□□□ -0.31
HDDC2-206ENST00000608461 CYP27C1Q4G0S4 372 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 TTMPQ5BVD1 217 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 CT45A2Q5DJT8 189 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 ZCCHC12Q6PEW1 402 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 TMEM107Q6UX40 140 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 GHDCQ8N2G8 530 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms