RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 CELSR2Q9HCU4 2923 aa17.64■□□□□ 0.41
CTSA-217ENST00000607482 A0A1B0GVC2 190 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 SERTM1A2A2V5 107 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 SLC28A1O00337 649 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 TRIM13O60858 407 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 PPM1BO75688 479 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 SLU7O95391 586 aaKnown RBP17.63■□□□□ 0.41
CTSA-217ENST00000607482 NAGAP17050 411 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 DDCP20711 480 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 S1PR1P21453 382 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 CHRNB4P30926 498 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 NTSP30990 170 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 MGAT2Q10469 447 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 GALNT18Q6P9A2 607 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 EMBQ6PCB8 327 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 B3GNT6Q6ZMB0 384 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 NUP54Q7Z3B4 507 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 ERP27Q96DN0 273 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 OMA1Q96E52 524 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 APOPT1Q96IL0 206 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 ZNF681Q96N22 645 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 EML4Q9HC35 981 aaKnown RBP17.63■□□□□ 0.41
CTSA-217ENST00000607482 KCNJ16Q9NPI9 418 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 QPCTLQ9NXS2 382 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 TAS2R9Q9NYW1 312 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 EHD3Q9NZN3 535 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 DTX4Q9Y2E6 619 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 OR10H1Q9Y4A9 318 aa17.63■□□□□ 0.41
CTSA-217ENST00000607482 NBPF19A0A087WUL8 3843 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 CACNA1DQ01668 2161 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 FAM47E-STBD1D6RA91 191 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 WDR1O75083 606 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 REM1O75628 298 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 RSL1D1O76021 490 aaKnown RBP17.62■□□□□ 0.41
CTSA-217ENST00000607482 RFPL3SP0C7P2 107 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 DRD5P21918 477 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 IL12BP29460 328 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 PTGER4P35408 488 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 PPICP45877 212 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 NCBP2P52298 156 aaKnown RBP eCLIP17.62■□□□□ 0.41
CTSA-217ENST00000607482 SLC18A2Q05940 514 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 BICRALQ6AI39 1079 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 CLEC6AQ6EIG7 209 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 TRIM46Q7Z4K8 759 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 GDF7Q7Z4P5 450 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 TICAM1Q8IUC6 712 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 HOMEZQ8IX15 550 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 FAM76AQ8TAV0 307 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 TMCO6Q96DC7 493 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 TRMOQ9BU70 441 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 ANGPTL4Q9BY76 406 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 SLC6A15Q9H2J7 730 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 WBP11Q9Y2W2 641 aaKnown RBP17.62■□□□□ 0.41
CTSA-217ENST00000607482 PCNX1Q96RV3 2341 aa17.62■□□□□ 0.41
CTSA-217ENST00000607482 TEX15Q9BXT5 2789 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 FRG2CA6NGY1 282 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 FAM90A27PA6NNH2 459 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 GNB5O14775 395 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 AZIN1O14977 448 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 CBX7O95931 251 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 ABCB1P08183 1280 aaPredicted RBP17.61■□□□□ 0.41
CTSA-217ENST00000607482 HOXD4P09016 255 aaPredicted RBP17.61■□□□□ 0.41
CTSA-217ENST00000607482 NUDT17P0C025 328 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 GABRA1P14867 456 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 ELAVL4P26378 380 aaKnown RBP17.61■□□□□ 0.41
CTSA-217ENST00000607482 CASP3P42574 277 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 DUSP2Q05923 314 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 ZNF628Q5EBL2 1059 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 EMC4Q5J8M3 183 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 NOXRED1Q6NXP6 359 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 ANGPTL8Q6UXH0 198 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 DDIASQ8IXT1 998 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 OR1J4Q8NGS1 313 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 NEIL3Q8TAT5 605 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 ZNF675Q8TD23 568 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 CTHRC1Q96CG8 243 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 DTNBP1Q96EV8 351 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 COL21A1Q96P44 957 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 GNRHR2Q96P88 292 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 FAM111AQ96PZ2 611 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 ROPN1BQ9BZX4 212 aaPredicted RBP17.61■□□□□ 0.41
CTSA-217ENST00000607482 ROPN1Q9HAT0 212 aaPredicted RBP17.61■□□□□ 0.41
CTSA-217ENST00000607482 ACKR4Q9NPB9 350 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.61■□□□□ 0.41
CTSA-217ENST00000607482 ZNF639Q9UID6 485 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 RNF6Q9Y252 685 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 HRH3Q9Y5N1 445 aa17.61■□□□□ 0.41
CTSA-217ENST00000607482 V9GYY5 206 aaPredicted RBP17.61■□□□□ 0.41
CTSA-217ENST00000607482 EML6Q6ZMW3 1958 aa17.6■□□□□ 0.41
CTSA-217ENST00000607482 LRRC3CA6NJW4 275 aa17.6■□□□□ 0.41
CTSA-217ENST00000607482 COQ9O75208 318 aa17.6■□□□□ 0.41
CTSA-217ENST00000607482 TRIM3O75382 744 aaPredicted RBP17.6■□□□□ 0.41
CTSA-217ENST00000607482 SPAG7O75391 227 aa17.6■□□□□ 0.41
CTSA-217ENST00000607482 JUNP05412 331 aaKnown RBP17.6■□□□□ 0.41
CTSA-217ENST00000607482 NUP107P57740 925 aa17.6■□□□□ 0.41
CTSA-217ENST00000607482 PSPHP78330 225 aa17.6■□□□□ 0.41
CTSA-217ENST00000607482 MRPS22P82650 360 aaKnown RBP17.6■□□□□ 0.41
CTSA-217ENST00000607482 ZNF155Q12901 538 aaPredicted RBP17.6■□□□□ 0.41
CTSA-217ENST00000607482 SF3B4Q15427 424 aaKnown RBP eCLIP17.6■□□□□ 0.415e-11■■■■■ 36.9
CTSA-217ENST00000607482 C1orf185Q5T7R7 199 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms