RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 PAPSS2O95340 614 aaPredicted RBP4.48□□□□□ -1.69
LINC01109-201ENST00000603837 AMHP03971 560 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 FGF3P11487 239 aaPredicted RBP4.48□□□□□ -1.69
LINC01109-201ENST00000603837 B4GALT1P15291 398 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 RPA2P15927 270 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 SPI1P17947 270 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 ADRA2CP18825 462 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 PRDX5P30044 214 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 GRK4P32298 578 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 SREBF1P36956 1147 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 ETV6P41212 452 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 SLC1A2P43004 574 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 OAZ1P54368 228 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 CDH4P55283 916 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 RPS16P62249 146 aaKnown RBP4.48□□□□□ -1.69
LINC01109-201ENST00000603837 EMX1Q04741 257 aaPredicted RBP4.48□□□□□ -1.69
LINC01109-201ENST00000603837 EGR3Q06889 387 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 C2orf80Q0P641 193 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 DAG1Q14118 895 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 RCAN2Q14206 197 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 SMCO1Q147U7 214 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 RBMS2Q15434 407 aaKnown RBP4.48□□□□□ -1.69
LINC01109-201ENST00000603837 NPY5RQ15761 445 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 RAB30Q15771 203 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 TATDN3Q17R31 274 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 CELF3Q5SZQ8 465 aaKnown RBP4.48□□□□□ -1.69
LINC01109-201ENST00000603837 ARMC12Q5T9G4 340 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 RIPPLY2Q5TAB7 128 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 LGSNQ5TDP6 509 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 GLYATQ6IB77 296 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 CES5AQ6NT32 575 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 SCIMPQ6UWF3 145 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 TPGS1Q6ZTW0 290 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 UBE2J2Q8N2K1 259 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 STX19Q8N4C7 294 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 CERS5Q8N5B7 392 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 CISD2Q8N5K1 135 aaKnown RBP4.48□□□□□ -1.69
LINC01109-201ENST00000603837 NHLRC2Q8NBF2 726 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 OR8D4Q8NGM9 314 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 TRMT10AQ8TBZ6 339 aaKnown RBP4.48□□□□□ -1.69
LINC01109-201ENST00000603837 RDH11Q8TC12 318 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 SDR42E1Q8WUS8 393 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 C1GALT1C1Q96EU7 318 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 SLC45A3Q96JT2 553 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 FAM71F1Q96KD3 344 aaPredicted RBP4.48□□□□□ -1.69
LINC01109-201ENST00000603837 FAM84BQ96KN1 310 aaPredicted RBP4.48□□□□□ -1.69
LINC01109-201ENST00000603837 ASCL2Q99929 193 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 SLC30A2Q9BRI3 323 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 ZNF577Q9BSK1 485 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 SYT11Q9BT88 431 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 DPH7Q9BTV6 452 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 NXF2Q9GZY0 626 aaKnown RBP4.48□□□□□ -1.69
LINC01109-201ENST00000603837 PCIF1Q9H4Z3 704 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 DDX31Q9H8H2 851 aaKnown RBP4.48□□□□□ -1.69
LINC01109-201ENST00000603837 ACTR8Q9H981 624 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 ZBTB20Q9HC78 741 aaPredicted RBP4.48□□□□□ -1.69
LINC01109-201ENST00000603837 CHRAC1Q9NRG0 131 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 C19orf12Q9NSK7 152 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 PPP4R1LQ9P1A2 415 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 ONECUT1Q9UBC0 465 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 XPR1Q9UBH6 696 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 ZNF225Q9UK10 706 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 DNPEPQ9ULA0 475 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 PCDHA6Q9UN73 950 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 CCL27Q9Y4X3 112 aa4.48□□□□□ -1.69
LINC01109-201ENST00000603837 OR2AT4A6NND4 320 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 M0QYV0 167 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 KCNK1O00180 336 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 HAS3O00219 553 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 CBX4O00257 560 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 GRM6O15303 877 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 TOX3O15405 576 aaPredicted RBP4.47□□□□□ -1.69
LINC01109-201ENST00000603837 EIF4EBP3O60516 100 aaPredicted RBP4.47□□□□□ -1.69
LINC01109-201ENST00000603837 SELENOFO60613 162 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 B4GALT2O60909 372 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 GLRA3O75311 464 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 CREG1O75629 220 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 CYP7B1O75881 506 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 WDR47O94967 919 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 GADD45GO95257 159 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 PEX11BO96011 259 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 CSF2P04141 144 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 CYBBP04839 570 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 ITGAMP11215 1152 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 HLA-EP13747 358 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 MUC1P15941 1255 aaPredicted RBP4.47□□□□□ -1.69
LINC01109-201ENST00000603837 PVALBP20472 110 aaPredicted RBP4.47□□□□□ -1.69
LINC01109-201ENST00000603837 PRPS1L1P21108 318 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 ATP6V1B2P21281 511 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 EDNRBP24530 442 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 ATP5A1P25705 553 aaKnown RBP4.47□□□□□ -1.69
LINC01109-201ENST00000603837 SPRP35270 261 aaPredicted RBP4.47□□□□□ -1.69
LINC01109-201ENST00000603837 MC3RP41968 323 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 MAP2K4P45985 399 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 NUMBP49757 651 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 SUCLG1P53597 346 aaKnown RBP4.47□□□□□ -1.69
LINC01109-201ENST00000603837 RRAS2P62070 204 aaPredicted RBP4.47□□□□□ -1.69
LINC01109-201ENST00000603837 GTF2BQ00403 316 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 DEFA5Q01523 94 aa4.47□□□□□ -1.69
LINC01109-201ENST00000603837 MBTD1Q05BQ5 628 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms