RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 C10orf90Q96M02 699 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 CCDC140Q96MF4 163 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 TMEM121Q9BTD3 319 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 ANKRD60Q9BZ19 345 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 METTL9Q9H1A3 318 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 PDZD7Q9H5P4 517 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 NIPAL2Q9H841 368 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 ANKHQ9HCJ1 492 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 IMPAD1Q9NX62 359 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 OR6C3Q9NZP0 311 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 PIM2Q9P1W9 311 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 SEC14L3Q9UDX4 400 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 PCYOX1Q9UHG3 505 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 ECM29Q5VYK3 1845 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 PRAMEF22A3QJZ6 481 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 YDJCA8MPS7 323 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 DLGAP1O14490 977 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 TOX3O15405 576 aaPredicted RBP4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 CYP26A1O43174 497 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 SIGLEC6O43699 453 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 PAGE4O60829 102 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 ERN1O75460 977 aaKnown RBP4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 POP7O75817 140 aaKnown RBP4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 KAT7O95251 611 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 VIPP01282 170 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 C8AP07357 584 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 ZDHHC11BP0C7U3 371 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 PLA2G4BP0C869 781 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 SPATA31C1P0DKV0 1188 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 PNMTP11086 282 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 CD1EP15812 388 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 JUNBP17275 347 aaPredicted RBP4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 MSH3P20585 1137 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 DDX6P26196 483 aaKnown RBP eCLIP4.74□□□□□ -1.655e-6■■■■■ 46.6
SPTBN1-206ENST00000602898 TACR3P29371 465 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 PTGER4P35408 488 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 CTSKP43235 329 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 SERPINB10P48595 397 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 VEGFCP49767 419 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 EFNB1P98172 346 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 HSF2Q03933 536 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 TLE1Q04724 770 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 MGAT2Q10469 447 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 RAB32Q13637 225 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 NFYCQ13952 458 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 EMC2Q15006 297 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 ACOX1Q15067 660 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 PCOLCEQ15113 449 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 DUOXA2Q1HG44 320 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 PARP15Q460N3 678 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 TMEM41BQ5BJD5 291 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 PDZK1Q5T2W1 519 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 ATG9BQ674R7 924 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 TIGD3Q6B0B8 471 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 C11orf63Q6NUN7 778 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 LINC00114Q6XXX2 140 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 C16orf62Q7Z3J2 963 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 GALNT10Q86SR1 603 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 LUZP2Q86TE4 346 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 COMMD7Q86VX2 200 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 ZFAND4Q86XD8 727 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 TCTE3Q8IZS6 198 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 METTL4Q8N3J2 472 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 C19orf18Q8NEA5 215 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 OR5D13Q8NGL4 314 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 RHEBL1Q8TAI7 183 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 DEDD2Q8WXF8 326 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 PPP3R2Q96LZ3 170 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 RTP3Q9BQQ7 232 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 MED18Q9BUE0 208 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 BEX2Q9BXY8 128 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 SEMA6AQ9H2E6 1030 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 SPNS1Q9H2V7 528 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 SRD5A3Q9H8P0 318 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 BCO1Q9HAY6 547 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 SLCO1B3Q9NPD5 702 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 PAK6Q9NQU5 681 aaPredicted RBP4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 POLE4Q9NR33 117 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 NDRG3Q9UGV2 375 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 UBQLN2Q9UHD9 624 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 RIMS3Q9UJD0 308 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 BAIAP2Q9UQB8 552 aa4.74□□□□□ -1.65
SPTBN1-206ENST00000602898 A0A0U1RRA0 63 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 MROH6A6NGR9 719 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 MANSC4A6NHS7 340 aaPredicted RBP4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 SLC38A8A6NNN8 435 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 ERI2A8K979 691 aaKnown RBP4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 ARPC3O15145 178 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 INPPL1O15357 1258 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 AMY1AP04745 511 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 OR4E1P0C645 316 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 CD36P16671 472 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 RAB6AP20340 208 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 OGNP20774 298 aaKnown RBP4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 FMO4P31512 558 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 SEC61GP60059 68 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 PRPS1P60891 318 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 PSPHP78330 225 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 CDC42EP1Q00587 391 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 MEF2AQ02078 507 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms