RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 TNIP2Q8NFZ5 429 aa19.4■□□□□ 0.7
PPFIA3-209ENST00000602783 OR7G1Q8NGA0 311 aa19.4■□□□□ 0.7
PPFIA3-209ENST00000602783 UBLCP1Q8WVY7 318 aaPredicted RBP19.4■□□□□ 0.7
PPFIA3-209ENST00000602783 KCNA7Q96RP8 456 aa19.4■□□□□ 0.7
PPFIA3-209ENST00000602783 FAIM2Q9BWQ8 316 aa19.4■□□□□ 0.7
PPFIA3-209ENST00000602783 ACPTQ9BZG2 426 aa19.4■□□□□ 0.7
PPFIA3-209ENST00000602783 BRINP2Q9C0B6 783 aa19.4■□□□□ 0.7
PPFIA3-209ENST00000602783 GSTO2Q9H4Y5 243 aa19.4■□□□□ 0.7
PPFIA3-209ENST00000602783 MAT2BQ9NZL9 334 aa19.4■□□□□ 0.7
PPFIA3-209ENST00000602783 DCDC2Q9UHG0 476 aa19.4■□□□□ 0.7
PPFIA3-209ENST00000602783 DTX4Q9Y2E6 619 aa19.4■□□□□ 0.7
PPFIA3-209ENST00000602783 KDM4EB2RXH2 506 aaPredicted RBP19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 ULK1O75385 1050 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 ATP1B1P05026 303 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 HPNP05981 417 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 ENO1P06733 434 aaKnown RBP19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 CD1EP15812 388 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 KRT15P19012 456 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 S1PR1P21453 382 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 GPX3P22352 226 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 DNAJA1P31689 397 aaKnown RBP19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 UQCRC1P31930 480 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 SLCO1A2P46721 670 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 CDK9P50750 372 aaKnown RBP19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 PKNOX1P55347 436 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 WNT3P56703 355 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 TRA2BP62995 288 aaKnown RBP19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 PRICKLE4Q2TBC4 344 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 ACSF3Q4G176 576 aaPredicted RBP19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 FNDC7Q5VTL7 733 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 FAM180BQ6P0A1 224 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 FAM111BQ6SJ93 734 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 NAXEQ8NCW5 288 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 C17orf47Q8NEP4 570 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 NXF5Q9H1B4 397 aaKnown RBP19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 UBQLN3Q9H347 655 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 DNAJB12Q9NXW2 375 aaKnown RBP19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 HEY2Q9UBP5 337 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 MCM8Q9UJA3 840 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 SLC6A5Q9Y345 797 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 TIMM22Q9Y584 194 aa19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 SETD2Q9BYW2 2564 aaPredicted RBP19.39■□□□□ 0.69
PPFIA3-209ENST00000602783 SYT5O00445 386 aa19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 DVL2O14641 736 aa19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 GNB5O14775 395 aa19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 PCDH7O60245 1069 aa19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 ESRRBO95718 433 aa19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 MYL2P10916 166 aa19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 CSNK2A2P19784 350 aaPredicted RBP19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 BMP5P22003 454 aa19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 ABCD3P28288 659 aa19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 CEACAM8P31997 349 aaPredicted RBP19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 MTORP42345 2549 aa19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 KIR2DL3P43628 341 aa19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 RAE1P78406 368 aaKnown RBP19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 HMGCS1Q01581 520 aa19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 MGAT2Q10469 447 aa19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 EXOSC7Q15024 291 aaKnown RBP19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 TOMM20Q15388 145 aa19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 CCNYL1Q8N7R7 359 aa19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 GBP7Q8N8V2 638 aaPredicted RBP19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 EIF1ADQ8N9N8 165 aaKnown RBP19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 RELL2Q8NC24 303 aaPredicted RBP19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 ADCY4Q8NFM4 1077 aa19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 CNRIP1Q96F85 164 aaPredicted RBP19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 BCAP29Q9UHQ4 241 aa19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 PSME2Q9UL46 239 aa19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 C15orf41Q9Y2V0 281 aa19.38■□□□□ 0.69
PPFIA3-209ENST00000602783 SMIM23A6NLE4 172 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 G3V2L1 256 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 CTAG2O75638 210 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 IL2RAP01589 272 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 PROCP04070 461 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 ABCB1P08183 1280 aaPredicted RBP19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 IL3P08700 152 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 MAP4K2Q12851 820 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 LTB4RQ15722 352 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 NNATQ16517 81 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 EIPR1Q53HC9 387 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 SPIN4Q56A73 249 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 VASNQ6EMK4 673 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 ZYG11AQ6WRX3 759 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 PM20D2Q8IYS1 436 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 SIMC1Q8NDZ2 872 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 CCDC126Q96EE4 140 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 APIPQ96GX9 242 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 TMEM41AQ96HV5 264 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 ITPAQ9BY32 194 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 POLDIP3Q9BY77 421 aaKnown RBP19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 L2HGDHQ9H9P8 463 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 MID1IP1Q9NPA3 183 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 UTS2RQ9UKP6 389 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 CAMK2AQ9UQM7 478 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 CFL2Q9Y281 166 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 ZNF780BQ9Y6R6 833 aa19.37■□□□□ 0.69
PPFIA3-209ENST00000602783 GNG14A0A1W2PPG7 69 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 CCDC151A5D8V7 595 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 UBFD1O14562 309 aaKnown RBP19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 PPM1BO75688 479 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 BMP7P18075 431 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms