RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 EXOSC6Q5RKV6 272 aaKnown RBP13.33□□□□□ -0.28
UPF1-211ENST00000600868 BROXQ5VW32 411 aa13.33□□□□□ -0.28
UPF1-211ENST00000600868 NANOGP8Q6NSW7 305 aa13.33□□□□□ -0.28
UPF1-211ENST00000600868 MFSD12Q6NUT3 480 aa13.33□□□□□ -0.28
UPF1-211ENST00000600868 HSDL2Q6YN16 418 aa13.33□□□□□ -0.28
UPF1-211ENST00000600868 LRRC69Q6ZNQ3 347 aa13.33□□□□□ -0.28
UPF1-211ENST00000600868 CCDC121Q6ZUS5 278 aa13.33□□□□□ -0.28
UPF1-211ENST00000600868 ARPINQ7Z6K5 226 aa13.33□□□□□ -0.28
UPF1-211ENST00000600868 TMEM102Q8N9M5 508 aaPredicted RBP13.33□□□□□ -0.28
UPF1-211ENST00000600868 CDRT4Q8N9R6 151 aa13.33□□□□□ -0.28
UPF1-211ENST00000600868 OR8J3Q8NGG0 315 aa13.33□□□□□ -0.28
UPF1-211ENST00000600868 OR52N2Q8NGI0 321 aa13.33□□□□□ -0.28
UPF1-211ENST00000600868 FBXO27Q8NI29 283 aa13.33□□□□□ -0.28
UPF1-211ENST00000600868 MIPOL1Q8TD10 442 aa13.33□□□□□ -0.28
UPF1-211ENST00000600868 AURKBQ96GD4 344 aaPredicted RBP13.33□□□□□ -0.28
UPF1-211ENST00000600868 VSTM2LQ96N03 204 aa13.33□□□□□ -0.28
UPF1-211ENST00000600868 SH3GL1Q99961 368 aa13.33□□□□□ -0.28
UPF1-211ENST00000600868 CPPED1Q9BRF8 314 aaPredicted RBP13.33□□□□□ -0.28
UPF1-211ENST00000600868 SLC39A3Q9BRY0 314 aa13.33□□□□□ -0.28
UPF1-211ENST00000600868 ACTRT3Q9BYD9 372 aa13.33□□□□□ -0.28
UPF1-211ENST00000600868 C1orf21Q9H246 121 aa13.33□□□□□ -0.28
UPF1-211ENST00000600868 RAD21L1Q9H4I0 556 aa13.33□□□□□ -0.28
UPF1-211ENST00000600868 NANOGQ9H9S0 305 aa13.33□□□□□ -0.28
UPF1-211ENST00000600868 FAF1Q9UNN5 650 aaPredicted RBP13.33□□□□□ -0.28
UPF1-211ENST00000600868 CORO2BQ9UQ03 480 aa13.33□□□□□ -0.28
UPF1-211ENST00000600868 POLHQ9Y253 713 aa13.33□□□□□ -0.28
UPF1-211ENST00000600868 TRBV11-1A0A0K0K1C0 115 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 EVPLLA8MZ36 301 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 ZFAND5O76080 213 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 SOX30O94993 753 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 SERPINA7P05543 415 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 PRKAR1AP10644 381 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 GPX2P18283 190 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 MAP3K8P41279 467 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 MVDP53602 400 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 PSME3P61289 254 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 DCAF7P61962 342 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 RNF4P78317 190 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 MXRA7P84157 204 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 TLE3Q04726 772 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 Q0VFX4 171 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 AIMP2Q13155 320 aaKnown RBP13.32□□□□□ -0.28
UPF1-211ENST00000600868 FADDQ13158 208 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 LASP1Q14847 261 aaKnown RBP13.32□□□□□ -0.28
UPF1-211ENST00000600868 EBPQ15125 230 aaKnown RBP13.32□□□□□ -0.28
UPF1-211ENST00000600868 ATP1A1-AS1Q5TC04 95 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 C16orf89Q6UX73 402 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 CCDC81Q6ZN84 652 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 RINLQ6ZS11 566 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 SLC29A4Q7RTT9 530 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 GPR155Q7Z3F1 870 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 PROSER1Q86XN7 944 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 RNF130Q86XS8 419 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 C9orf40Q8IXQ3 194 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 KBTBD2Q8IY47 623 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 PGAM4Q8N0Y7 254 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 KIF2BQ8N4N8 673 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 AMER2Q8N7J2 671 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 RBM15BQ8NDT2 890 aaKnown RBP13.32□□□□□ -0.28
UPF1-211ENST00000600868 C17orf47Q8NEP4 570 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 NUBPLQ8TB37 319 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 C16orf58Q96GQ5 468 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 SLC35G5Q96KT7 338 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 DCBLD2Q96PD2 775 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 LMF2Q9BU23 707 aaKnown RBP13.32□□□□□ -0.28
UPF1-211ENST00000600868 FOLH1BQ9HBA9 442 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 ATP13A2Q9NQ11 1180 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 EQTNQ9NQ60 294 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 GIN1Q9NXP7 522 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 AP3M1Q9Y2T2 418 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 RAXQ9Y2V3 346 aa13.32□□□□□ -0.28
UPF1-211ENST00000600868 A0A087WV48 116 aa13.31□□□□□ -0.28
UPF1-211ENST00000600868 C2orf92A0A1B0GVN3 265 aa13.31□□□□□ -0.28
UPF1-211ENST00000600868 TAF4O00268 1085 aa13.31□□□□□ -0.28
UPF1-211ENST00000600868 NME6O75414 186 aaPredicted RBP13.31□□□□□ -0.28
UPF1-211ENST00000600868 C1QCP02747 245 aa13.31□□□□□ -0.28
UPF1-211ENST00000600868 CELA2AP08217 269 aa13.31□□□□□ -0.28
UPF1-211ENST00000600868 MATN1P21941 496 aa13.31□□□□□ -0.28
UPF1-211ENST00000600868 PPICP45877 212 aa13.31□□□□□ -0.28
UPF1-211ENST00000600868 MAN2A2P49641 1150 aa13.31□□□□□ -0.28
UPF1-211ENST00000600868 RASSF2P50749 326 aa13.31□□□□□ -0.28
UPF1-211ENST00000600868 ANXA11P50995 505 aaKnown RBP13.31□□□□□ -0.28
UPF1-211ENST00000600868 UCNP55089 124 aa13.31□□□□□ -0.28
UPF1-211ENST00000600868 SOX8P57073 446 aa13.31□□□□□ -0.28
UPF1-211ENST00000600868 SLC25A3Q00325 362 aa13.31□□□□□ -0.28
UPF1-211ENST00000600868 ZNF155Q12901 538 aaPredicted RBP13.31□□□□□ -0.28
UPF1-211ENST00000600868 CHAF1BQ13112 559 aa13.31□□□□□ -0.28
UPF1-211ENST00000600868 SELPLGQ14242 412 aa13.31□□□□□ -0.28
UPF1-211ENST00000600868 RGNQ15493 299 aa13.31□□□□□ -0.28
UPF1-211ENST00000600868 JMJD6Q6NYC1 403 aaPredicted RBP13.31□□□□□ -0.28
UPF1-211ENST00000600868 CDC73Q6P1J9 531 aa13.31□□□□□ -0.28
UPF1-211ENST00000600868 ANGPTL8Q6UXH0 198 aa13.31□□□□□ -0.28
UPF1-211ENST00000600868 OR5L2Q8NGL0 311 aa13.31□□□□□ -0.28
UPF1-211ENST00000600868 PNPT1Q8TCS8 783 aaKnown RBP13.31□□□□□ -0.28
UPF1-211ENST00000600868 ZCCHC14Q8WYQ9 949 aaKnown RBP13.31□□□□□ -0.28
UPF1-211ENST00000600868 ADIPOR1Q96A54 375 aa13.31□□□□□ -0.28
UPF1-211ENST00000600868 TMEM125Q96AQ2 219 aa13.31□□□□□ -0.28
UPF1-211ENST00000600868 SLC7A6OSQ96CW6 309 aaPredicted RBP13.31□□□□□ -0.28
UPF1-211ENST00000600868 BTBD9Q96Q07 612 aa13.31□□□□□ -0.28
UPF1-211ENST00000600868 STACQ99469 402 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms