RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 TRMT12Q53H54 448 aaKnown RBP14.91□□□□□ -0.02
LSM4-206ENST00000600289 C6orf136Q5SQH8 315 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 ADCY4Q8NFM4 1077 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 OR52R1Q8NGF1 315 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 OR9A2Q8NGT5 310 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 CDC26Q8NHZ8 85 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 HSPBAP1Q96EW2 488 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 C3orf30Q96M34 536 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 BBS4Q96RK4 519 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 SECISBP2Q96T21 854 aaKnown RBP14.91□□□□□ -0.02
LSM4-206ENST00000600289 REEP4Q9H6H4 257 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 DEPPQ9NTK1 212 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 ASIC5Q9NY37 505 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 CNIH4Q9P003 139 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 SEC14L3Q9UDX4 400 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 DTX4Q9Y2E6 619 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 POLEQ07864 2286 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 MTORP42345 2549 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 PLOD2O00469 737 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 TO15178 435 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 ACOX3O15254 700 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 SKAP2O75563 359 aaPredicted RBP14.9□□□□□ -0.02
LSM4-206ENST00000600289 BCKDHAP12694 445 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 DDX5P17844 614 aaKnown RBP14.9□□□□□ -0.02
LSM4-206ENST00000600289 CNR1P21554 472 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 NTSP30990 170 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 RPL3P39023 403 aaKnown RBP14.9□□□□□ -0.02
LSM4-206ENST00000600289 FRKP42685 505 aaPredicted RBP14.9□□□□□ -0.02
LSM4-206ENST00000600289 PPICP45877 212 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 NR0B1P51843 470 aaKnown RBP14.9□□□□□ -0.02
LSM4-206ENST00000600289 NRG3P56975 720 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 MRPS35P82673 323 aaKnown RBP14.9□□□□□ -0.02
LSM4-206ENST00000600289 BST1Q10588 318 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 MAD2L1Q13257 205 aaPredicted RBP14.9□□□□□ -0.02
LSM4-206ENST00000600289 EXOSC7Q15024 291 aaKnown RBP14.9□□□□□ -0.02
LSM4-206ENST00000600289 RPS6KA2Q15349 733 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 HYAL4Q2M3T9 481 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.9□□□□□ -0.022e-9■■■□□ 15.1
LSM4-206ENST00000600289 EIF2S3LQ2VIR3 472 aaKnown RBP14.9□□□□□ -0.02
LSM4-206ENST00000600289 RGS9BPQ6ZS82 235 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 FBXW8Q8N3Y1 598 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 ANKRD42Q8N9B4 389 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 OR2M7Q8NG81 312 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 ZBTB9Q96C00 473 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 LCORQ96JN0 433 aaPredicted RBP14.9□□□□□ -0.02
LSM4-206ENST00000600289 AMDHD1Q96NU7 426 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 BTBD9Q96Q07 612 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 FAM173AQ9BQD7 235 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 ITPAQ9BY32 194 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 GLIPR2Q9H4G4 154 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 ZNF395Q9H8N7 513 aaPredicted RBP14.9□□□□□ -0.02
LSM4-206ENST00000600289 NKIRAS1Q9NYS0 192 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 BCAP29Q9UHQ4 241 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 NPFFR2Q9Y5X5 522 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 CHCHD2Q9Y6H1 151 aaPredicted RBP14.9□□□□□ -0.02
LSM4-206ENST00000600289 SVILO95425 2214 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 NCKAP5O14513 1909 aa14.9□□□□□ -0.02
LSM4-206ENST00000600289 ANKRD33BA6NCL7 494 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 FRG2CA6NGY1 282 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 PEX11AO75192 247 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 SNNO75324 88 aaPredicted RBP14.89□□□□□ -0.03
LSM4-206ENST00000600289 GLSO94925 669 aaPredicted RBP14.89□□□□□ -0.03
LSM4-206ENST00000600289 UNC5CO95185 931 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 PSMG1O95456 288 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 LDLRP01130 860 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 P04436 131 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 JUNP05412 331 aaKnown RBP14.89□□□□□ -0.03
LSM4-206ENST00000600289 STSP08842 583 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 CCL3P10147 92 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 PRPS2P11908 318 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 DRD5P21918 477 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 PTGER1P34995 402 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 NCBP2P52298 156 aaKnown RBP eCLIP14.89□□□□□ -0.034e-7■□□□□ 8.2
LSM4-206ENST00000600289 C21orf58P58505 322 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 RNFT1Q5M7Z0 435 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 TBCELQ5QJ74 424 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 SLC22A10Q63ZE4 541 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 TMEM81Q6P7N7 255 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 GFRALQ6UXV0 394 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 GK5Q6ZS86 529 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 HDXQ7Z353 690 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 R3HCC1LQ7Z5L2 792 aaKnown RBP14.89□□□□□ -0.03
LSM4-206ENST00000600289 TRIM42Q8IWZ5 723 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 SIMC1Q8NDZ2 872 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 OR7G2Q8NG99 324 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 PRR7Q8TB68 274 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 NTNG2Q96CW9 530 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 VSTM2LQ96N03 204 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 TSSK3Q96PN8 268 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 SH3GL2Q99962 352 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 PAIP2Q9BPZ3 127 aaKnown RBP14.89□□□□□ -0.03
LSM4-206ENST00000600289 NXF5Q9H1B4 397 aaKnown RBP14.89□□□□□ -0.03
LSM4-206ENST00000600289 ATP6V1HQ9UI12 483 aa14.89□□□□□ -0.03
LSM4-206ENST00000600289 GPR55Q9Y2T6 319 aaPredicted RBP14.89□□□□□ -0.03
LSM4-206ENST00000600289 ATP6AP2A0A1C7CYW4 349 aa14.88□□□□□ -0.03
LSM4-206ENST00000600289 PINLYPA6NC86 204 aa14.88□□□□□ -0.03
LSM4-206ENST00000600289 TP53I11O14683 189 aa14.88□□□□□ -0.03
LSM4-206ENST00000600289 KLF11O14901 512 aa14.88□□□□□ -0.03
LSM4-206ENST00000600289 PDPK1O15530 556 aa14.88□□□□□ -0.03
LSM4-206ENST00000600289 COQ9O75208 318 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms