RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 MBD3L4A6NDZ8 208 aaPredicted RBP13.39□□□□□ -0.27
IRF3-223ENST00000599223 MBD3L3A6NE82 208 aaPredicted RBP13.39□□□□□ -0.27
IRF3-223ENST00000599223 MBD3L5A6NJ08 208 aaPredicted RBP13.39□□□□□ -0.27
IRF3-223ENST00000599223 AHRRA9YTQ3 701 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 TP53I11O14683 189 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 GNB5O14775 395 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 SNX4O95219 450 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 CLDN9O95484 217 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 CPMP14384 443 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 NT5EP21589 574 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 ARL1P40616 181 aaPredicted RBP13.39□□□□□ -0.27
IRF3-223ENST00000599223 MAGEA12P43365 314 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 SLCO1A2P46721 670 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 XKP51811 444 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 NAGLUP54802 743 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 EXOSC7Q15024 291 aaKnown RBP13.39□□□□□ -0.27
IRF3-223ENST00000599223 NHSL2Q5HYW2 709 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 HLA-DQA1Q5Y7H0 255 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 FRG2Q64ET8 278 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 FAM180BQ6P0A1 224 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 FAM111BQ6SJ93 734 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 PLXDC2Q6UX71 529 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 PAMR1Q6UXH9 720 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 CCDC91Q7Z6B0 441 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 C9orf106Q8NAJ2 232 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 FAM83FQ8NEG4 500 aaPredicted RBP13.39□□□□□ -0.27
IRF3-223ENST00000599223 OR4K14Q8NGD5 310 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 MBD3L2Q8NHZ7 208 aaPredicted RBP13.39□□□□□ -0.27
IRF3-223ENST00000599223 FAM222BQ8WU58 562 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 HGDQ93099 445 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 PHF21BQ96EK2 531 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 HSPBAP1Q96EW2 488 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 TMEM41AQ96HV5 264 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 FRG2BQ96QU4 278 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 TRIB1Q96RU8 372 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 NODALQ96S42 347 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 SECISBP2Q96T21 854 aaKnown RBP13.39□□□□□ -0.27
IRF3-223ENST00000599223 SERPINI1Q99574 410 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 VPS11Q9H270 941 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 GALNT9Q9HCQ5 603 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 FAM53CQ9NYF3 392 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 PSD3Q9NYI0 1048 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 MAT2BQ9NZL9 334 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 EHD3Q9NZN3 535 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 XPR1Q9UBH6 696 aa13.39□□□□□ -0.27
IRF3-223ENST00000599223 CCDC189A1A4V9 331 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 C2orf72A6NCS6 295 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 HMGB1P1B2RPK0 211 aaPredicted RBP13.38□□□□□ -0.27
IRF3-223ENST00000599223 EEF1E1-BLOC1S5C9J1V9 151 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 PPP6CO00743 305 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 EEF1E1O43324 174 aaKnown RBP13.38□□□□□ -0.27
IRF3-223ENST00000599223 ABCB1P08183 1280 aaPredicted RBP13.38□□□□□ -0.27
IRF3-223ENST00000599223 CNTFP26441 200 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 TYK2P29597 1187 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 TMED10P49755 219 aaKnown RBP13.38□□□□□ -0.27
IRF3-223ENST00000599223 CCNG1P51959 295 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 GALNT1Q10472 559 aaPredicted RBP13.38□□□□□ -0.27
IRF3-223ENST00000599223 TOMM20Q15388 145 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 LTB4RQ15722 352 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 PRICKLE4Q2TBC4 344 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 SGO1Q5FBB7 561 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 TIGD3Q6B0B8 471 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 LETMD1Q6P1Q0 360 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 KLC3Q6P597 504 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 ANGPTL8Q6UXH0 198 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 COMMD6Q7Z4G1 85 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 YRDCQ86U90 279 aaKnown RBP13.38□□□□□ -0.27
IRF3-223ENST00000599223 PACS2Q86VP3 889 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 VWA5B2Q8N398 1253 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 C17orf47Q8NEP4 570 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 HBEGFQ99075 208 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 TMEM109Q9BVC6 243 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 EPB41L4BQ9H329 900 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 GSX1Q9H4S2 264 aaPredicted RBP13.38□□□□□ -0.27
IRF3-223ENST00000599223 RYDENQ9NUL5 291 aaKnown RBP13.38□□□□□ -0.27
IRF3-223ENST00000599223 ZNF629Q9UEG4 869 aaPredicted RBP13.38□□□□□ -0.27
IRF3-223ENST00000599223 CES1P1Q9UKY3 287 aa13.38□□□□□ -0.27
IRF3-223ENST00000599223 TNPO3Q9Y5L0 923 aaKnown RBP13.38□□□□□ -0.27
IRF3-223ENST00000599223 NSD1Q96L73 2696 aaPredicted RBP13.37□□□□□ -0.27
IRF3-223ENST00000599223 A0A1W2PPR1 153 aa13.37□□□□□ -0.27
IRF3-223ENST00000599223 CD8B2A6NJW9 211 aa13.37□□□□□ -0.27
IRF3-223ENST00000599223 CAPN14A8MX76 684 aa13.37□□□□□ -0.27
IRF3-223ENST00000599223 B4DXG7 233 aa13.37□□□□□ -0.27
IRF3-223ENST00000599223 SNPHO15079 494 aa13.37□□□□□ -0.27
IRF3-223ENST00000599223 RGS16O15492 202 aaPredicted RBP13.37□□□□□ -0.27
IRF3-223ENST00000599223 RRP9O43818 475 aaKnown RBP13.37□□□□□ -0.27
IRF3-223ENST00000599223 NME6O75414 186 aaPredicted RBP13.37□□□□□ -0.27
IRF3-223ENST00000599223 PPM1BO75688 479 aa13.37□□□□□ -0.27
IRF3-223ENST00000599223 CBX7O95931 251 aa13.37□□□□□ -0.27
IRF3-223ENST00000599223 IL2RAP01589 272 aa13.37□□□□□ -0.27
IRF3-223ENST00000599223 RPS17P08708 135 aaKnown RBP13.37□□□□□ -0.27
IRF3-223ENST00000599223 TSPAN8P19075 237 aa13.37□□□□□ -0.27
IRF3-223ENST00000599223 FEN1P39748 380 aaKnown RBP13.37□□□□□ -0.27
IRF3-223ENST00000599223 MAPK12P53778 367 aa13.37□□□□□ -0.27
IRF3-223ENST00000599223 NRG3P56975 720 aa13.37□□□□□ -0.27
IRF3-223ENST00000599223 ZNF844Q08AG5 666 aa13.37□□□□□ -0.27
IRF3-223ENST00000599223 FOXF2Q12947 444 aa13.37□□□□□ -0.27
IRF3-223ENST00000599223 CCNYL2Q5T2Q4 361 aa13.37□□□□□ -0.27
IRF3-223ENST00000599223 SLC48A1Q6P1K1 146 aa13.37□□□□□ -0.27
IRF3-223ENST00000599223 METTL2BQ6P1Q9 378 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms