RNA–Protein interactions for RNA: ENST00000597423.1

TRIM28-209, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-209ENST00000597423 OR2Y1Q8NGV0 311 aa14.22□□□□□ -0.13
TRIM28-209ENST00000597423 PTPMT1Q8WUK0 201 aaPredicted RBP14.22□□□□□ -0.13
TRIM28-209ENST00000597423 WDR60Q8WVS4 1066 aa14.22□□□□□ -0.13
TRIM28-209ENST00000597423 FIG4Q92562 907 aa14.22□□□□□ -0.13
TRIM28-209ENST00000597423 NCLNQ969V3 563 aa14.22□□□□□ -0.13
TRIM28-209ENST00000597423 FAM162AQ96A26 154 aa14.22□□□□□ -0.13
TRIM28-209ENST00000597423 NACC2Q96BF6 587 aa14.22□□□□□ -0.13
TRIM28-209ENST00000597423 RSRC1Q96IZ7 334 aaKnown RBP14.22□□□□□ -0.13
TRIM28-209ENST00000597423 STACQ99469 402 aa14.22□□□□□ -0.13
TRIM28-209ENST00000597423 SPSB2Q99619 263 aa14.22□□□□□ -0.13
TRIM28-209ENST00000597423 LPAR4Q99677 370 aa14.22□□□□□ -0.13
TRIM28-209ENST00000597423 NRSN2Q9GZP1 204 aa14.22□□□□□ -0.13
TRIM28-209ENST00000597423 OR10A5Q9H207 317 aa14.22□□□□□ -0.13
TRIM28-209ENST00000597423 EQTNQ9NQ60 294 aa14.22□□□□□ -0.13
TRIM28-209ENST00000597423 DLL3Q9NYJ7 618 aa14.22□□□□□ -0.13
TRIM28-209ENST00000597423 ERVK-19Q9WJR5 959 aa14.22□□□□□ -0.13
TRIM28-209ENST00000597423 MYO15AQ9UKN7 3530 aa14.22□□□□□ -0.13
TRIM28-209ENST00000597423 RIF1Q5UIP0 2472 aaKnown RBP14.22□□□□□ -0.13
TRIM28-209ENST00000597423 ADAMTS20P59510 1910 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 CROCCQ5TZA2 2017 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 A0A1W2PNU3 283 aaPredicted RBP14.21□□□□□ -0.13
TRIM28-209ENST00000597423 ARPC2O15144 300 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 RAD1O60671 282 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 FKBP6O75344 327 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 CREG1O75629 220 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 PDE9AO76083 593 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 SORBS2O94875 1100 aaKnown RBP14.21□□□□□ -0.13
TRIM28-209ENST00000597423 AK1P00568 194 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 CT62P0C5K7 136 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 OR12D1P0DN82 309 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 ARAFP10398 606 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 UMPSP11172 480 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 S1PR1P21453 382 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 CASP9P55211 416 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 POLE2P56282 527 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 DCAF7P61962 342 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 RPS26P62854 115 aaKnown RBP14.21□□□□□ -0.13
TRIM28-209ENST00000597423 SCARB2Q14108 478 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 ADRM1Q16186 407 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 SFT2D3Q587I9 215 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 FAAH2Q6GMR7 532 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 ZFP1Q6P2D0 407 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 TMEM205Q6UW68 189 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 FAM198BQ6UWH4 519 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 RNF111Q6ZNA4 994 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 DGAT2L6Q6ZPD8 337 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 C16orf62Q7Z3J2 963 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 PATL1Q86TB9 770 aaKnown RBP14.21□□□□□ -0.13
TRIM28-209ENST00000597423 PTOV1Q86YD1 416 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 SPPL2CQ8IUH8 684 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 EID3Q8N140 333 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 ENDOVQ8N8Q3 282 aaKnown RBP14.21□□□□□ -0.13
TRIM28-209ENST00000597423 SLC9A6Q92581 669 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 C16orf58Q96GQ5 468 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 OR7D2Q96RA2 312 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 YIPF4Q9BSR8 244 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 SPATA5L1Q9BVQ7 753 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 OR8D2Q9GZM6 311 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 PIGUQ9H490 435 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 AKIRIN1Q9H9L7 192 aaPredicted RBP14.21□□□□□ -0.13
TRIM28-209ENST00000597423 CACYBPQ9HB71 228 aaKnown RBP14.21□□□□□ -0.13
TRIM28-209ENST00000597423 DUSP22Q9NRW4 184 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 FOXJ2Q9P0K8 574 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 KCND3Q9UK17 655 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 RPS6KA6Q9UK32 745 aa14.21□□□□□ -0.13
TRIM28-209ENST00000597423 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 PMS2P1A4D2B8 440 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 OR6C76A6NM76 312 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 HMGN4O00479 90 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 SLC28A2O43868 658 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 SERPINB7O75635 380 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 PSMG1O95456 288 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 CBX7O95931 251 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 TFPTP0C1Z6 253 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 KDELR2P33947 212 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 CRISP3P54108 245 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 PSPHP78330 225 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 ZNF155Q12901 538 aaPredicted RBP14.2□□□□□ -0.14
TRIM28-209ENST00000597423 RIPK1Q13546 671 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 ELOAQ14241 798 aaKnown RBP14.2□□□□□ -0.14
TRIM28-209ENST00000597423 SSPNQ14714 243 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 EXOSC7Q15024 291 aaKnown RBP14.2□□□□□ -0.14
TRIM28-209ENST00000597423 PRAMEF8Q5VWM4 474 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 PRAMEF7Q5VXH5 474 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 HLA-DQA1Q5Y7H0 255 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 AAGABQ6PD74 315 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 CYP2R1Q6VVX0 501 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 TIPARPQ7Z3E1 657 aaKnown RBP14.2□□□□□ -0.14
TRIM28-209ENST00000597423 KRT73Q86Y46 540 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 OR1N1Q8NGS0 311 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 SLC2A12Q8TD20 617 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 GPR151Q8TDV0 419 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 SLC26A7Q8TE54 656 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 CT55Q8WUE5 264 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 PMM1Q92871 262 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 RAB8BQ92930 207 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 GIMAP5Q96F15 307 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 RNF145Q96MT1 663 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 ZNF607Q96SK3 696 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 EFHD1Q9BUP0 239 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms