RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 CPT1CQ8TCG5 803 aa18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 NUDT8Q8WV74 236 aa18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 ADIPOR1Q96A54 375 aa18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 COQ8BQ96D53 544 aa18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 ELP4Q96EB1 424 aa18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 HES7Q9BYE0 225 aa18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 BHLHE41Q9C0J9 482 aaPredicted RBP18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 TIMMDC1Q9NPL8 285 aa18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 RYDENQ9NUL5 291 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 C19orf53Q9UNZ5 99 aaPredicted RBP18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 PCDHGB6Q9Y5F9 930 aa18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 COPG1Q9Y678 874 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 SVILO95425 2214 aa18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 NINQ8N4C6 2090 aa18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 UBDO15205 165 aa18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 EDF1O60869 148 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 IFI6P09912 130 aa18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 CDK9P50750 372 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 AQP5P55064 265 aa18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 DCAF7P61962 342 aa18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 ZNF155Q12901 538 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 INAQ16352 499 aa18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 NNATQ16517 81 aa18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 LSM12Q3MHD2 195 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 PRR30Q53SZ7 412 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 RTL4Q6ZR62 310 aa18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 SZRD1Q7Z422 152 aa18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 GALNTL5Q7Z4T8 443 aa18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 CAMKMTQ7Z624 323 aa18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 ZNF227Q86WZ6 799 aa18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 FAM98AQ8NCA5 519 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 C17orf47Q8NEP4 570 aa18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 SCMH1Q96GD3 660 aa18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 LCORQ96JN0 433 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 MARK4Q96L34 752 aa18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 NXF5Q9H1B4 397 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 FOLH1BQ9HBA9 442 aa18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 TCF7L2Q9NQB0 619 aa18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 KLF13Q9Y2Y9 288 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-214ENST00000597396 CAPN14A8MX76 684 aa18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 UPK1AO00322 258 aa18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 ANKRD28O15084 1053 aa18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 CFLARO15519 480 aa18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 ERN1O75460 977 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 RASAL1O95294 804 aa18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 IDO1P14902 403 aa18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 PPICP45877 212 aa18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 TMED10P49755 219 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 IDH3AP50213 366 aa18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 GUCY1A3Q02108 690 aa18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 SRSF11Q05519 484 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 MLC1Q15049 377 aa18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 DPY19L1Q2PZI1 675 aa18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 TMEM198Q66K66 360 aa18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 OR4F3Q6IEY1 312 aa18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 FAM180AQ6UWF9 173 aa18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 DND1Q8IYX4 353 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 OR2L13Q8N349 312 aa18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 OR5P2Q8WZ92 322 aa18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 SNRNP40Q96DI7 357 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 SPACA9Q96E40 222 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 HSPBAP1Q96EW2 488 aa18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 THOC1Q96FV9 657 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 ZBTB18Q99592 522 aa18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 C3orf14Q9HBI5 128 aa18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 NPFFR2Q9Y5X5 522 aa18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 GPR45Q9Y5Y3 372 aa18.15■□□□□ 0.5
SHKBP1-214ENST00000597396 NME2P1O60361 137 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 NME6O75414 186 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 C6orf47O95873 294 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 FBXO45P0C2W1 286 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 NME2P22392 152 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 KIR3DL1P43629 444 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 UFM1P61960 85 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 GSTA3Q16772 222 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 PDCD4Q53EL6 469 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 LYPD8Q6UX82 237 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 TMEM64Q6YI46 380 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 MDGA2Q7Z553 956 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 PRR22Q8IZ63 422 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 GOLM1Q8NBJ4 401 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 PSD4Q8NDX1 1056 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 FAM13CQ8NE31 585 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 TESCQ96BS2 214 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 SGCZQ96LD1 299 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 VSTM2LQ96N03 204 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 EBF4Q9BQW3 602 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 CCDC28BQ9BUN5 200 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 AGPAT4Q9NRZ5 378 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 ASF1BQ9NVP2 202 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 SNX8Q9Y5X2 465 aa18.14■□□□□ 0.49
SHKBP1-214ENST00000597396 FRG2CA6NGY1 282 aa18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 E9PBE3 544 aa18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 ACOX3O15254 700 aa18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 EMC8O43402 210 aa18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 ABCB1P08183 1280 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 VIMP08670 466 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 DRD5P21918 477 aa18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 S100A3P33764 101 aa18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 PRKAG1P54619 331 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms