RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 OR9A2Q8NGT5 310 aa13.93□□□□□ -0.18
TRIM28-207ENST00000597136 DNAJB8Q8NHS0 232 aa13.93□□□□□ -0.18
TRIM28-207ENST00000597136 PSMA8Q8TAA3 256 aa13.93□□□□□ -0.18
TRIM28-207ENST00000597136 ZNF721Q8TF20 911 aa13.93□□□□□ -0.18
TRIM28-207ENST00000597136 ROPN1LQ96C74 230 aa13.93□□□□□ -0.18
TRIM28-207ENST00000597136 TRIM4Q9C037 500 aa13.93□□□□□ -0.18
TRIM28-207ENST00000597136 OR8D2Q9GZM6 311 aa13.93□□□□□ -0.18
TRIM28-207ENST00000597136 SLC25A18Q9H1K4 315 aa13.93□□□□□ -0.18
TRIM28-207ENST00000597136 LIN28AQ9H9Z2 209 aaKnown RBP13.93□□□□□ -0.18
TRIM28-207ENST00000597136 MMP25Q9NPA2 562 aa13.93□□□□□ -0.18
TRIM28-207ENST00000597136 GID8Q9NWU2 228 aa13.93□□□□□ -0.18
TRIM28-207ENST00000597136 PLA2G3Q9NZ20 509 aa13.93□□□□□ -0.18
TRIM28-207ENST00000597136 TUBD1Q9UJT1 453 aa13.93□□□□□ -0.18
TRIM28-207ENST00000597136 PPIEQ9UNP9 301 aaKnown RBP13.93□□□□□ -0.18
TRIM28-207ENST00000597136 PCDHB14Q9Y5E9 798 aa13.93□□□□□ -0.18
TRIM28-207ENST00000597136 CSAG2Q9Y5P2 127 aa13.93□□□□□ -0.18
TRIM28-207ENST00000597136 NCKAP5O14513 1909 aa13.93□□□□□ -0.18
TRIM28-207ENST00000597136 DNAJC13O75165 2243 aa13.93□□□□□ -0.18
TRIM28-207ENST00000597136 FXYD1O00168 92 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 OR10H2O60403 315 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 F10P00742 488 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 GSNP06396 782 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 ABCB1P08183 1280 aaPredicted RBP13.92□□□□□ -0.18
TRIM28-207ENST00000597136 KRT16P08779 473 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 HOXB9P17482 250 aaPredicted RBP13.92□□□□□ -0.18
TRIM28-207ENST00000597136 CPOXP36551 454 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 CDK9P50750 372 aaKnown RBP13.92□□□□□ -0.18
TRIM28-207ENST00000597136 ZNF267Q14586 743 aaPredicted RBP13.92□□□□□ -0.18
TRIM28-207ENST00000597136 LTB4RQ15722 352 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 AGAP7PQ5VUJ5 663 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 FAM111BQ6SJ93 734 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 DNAJC14Q6Y2X3 702 aaPredicted RBP13.92□□□□□ -0.18
TRIM28-207ENST00000597136 C16orf47Q6ZP98 133 aaPredicted RBP13.92□□□□□ -0.18
TRIM28-207ENST00000597136 ZNF621Q6ZSS3 439 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 ASB18Q6ZVZ8 466 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 YTHDF3Q7Z739 585 aaKnown RBP13.92□□□□□ -0.18
TRIM28-207ENST00000597136 DHDDSQ86SQ9 333 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 PTRH1Q86Y79 214 aaKnown RBP13.92□□□□□ -0.18
TRIM28-207ENST00000597136 RBM15BQ8NDT2 890 aaKnown RBP13.92□□□□□ -0.18
TRIM28-207ENST00000597136 SIMC1Q8NDZ2 872 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 C7orf57Q8NEG2 295 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 ADCY4Q8NFM4 1077 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 SLC2A12Q8TD20 617 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 THAP3Q8WTV1 239 aaPredicted RBP13.92□□□□□ -0.18
TRIM28-207ENST00000597136 SLC7A6OSQ96CW6 309 aaPredicted RBP13.92□□□□□ -0.18
TRIM28-207ENST00000597136 LRRC58Q96CX6 371 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 SENP5Q96HI0 755 aaPredicted RBP13.92□□□□□ -0.18
TRIM28-207ENST00000597136 AGAP4Q96P64 663 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 PHF12Q96QT6 1004 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 CXorf36Q9H7Y0 433 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 NEUROD4Q9HD90 331 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 SIRT3Q9NTG7 399 aaPredicted RBP13.92□□□□□ -0.18
TRIM28-207ENST00000597136 VAPAQ9P0L0 249 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 ZNF462Q96JM2 2506 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 TRBV5-3A0A0A0MS03 114 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 TRBV11-1A0A0K0K1C0 115 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 HNRNPCL1O60812 293 aaKnown RBP13.92□□□□□ -0.18
TRIM28-207ENST00000597136 ZCCHC18P0CG32 403 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 GPC1P35052 558 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 SOX11P35716 441 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 MXRA7P84157 204 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 SLC25A3Q00325 362 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 MGAT2Q10469 447 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 CAPRIN1Q14444 709 aaKnown RBP13.92□□□□□ -0.18
TRIM28-207ENST00000597136 GTDC1Q4AE62 458 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 ISLR2Q6UXK2 745 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 MSRB3Q8IXL7 192 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 MORN4Q8NDC4 146 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 OR14A16Q8NHC5 309 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 DAZLQ92904 295 aaKnown RBP13.92□□□□□ -0.18
TRIM28-207ENST00000597136 RIT1Q92963 219 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 CGREF1Q99674 301 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 SLC39A3Q9BRY0 314 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 C1orf21Q9H246 121 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 CDCP1Q9H5V8 836 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 CXorf21Q9HAI6 301 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 TAS2R1Q9NYW7 299 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 SLC25A37Q9NYZ2 338 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 VPS4AQ9UN37 437 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 SNX8Q9Y5X2 465 aa13.92□□□□□ -0.18
TRIM28-207ENST00000597136 SYNDIG1LA6NDD5 238 aa13.91□□□□□ -0.18
TRIM28-207ENST00000597136 TMEM200CA6NKL6 621 aa13.91□□□□□ -0.18
TRIM28-207ENST00000597136 ANP32DO95626 131 aa13.91□□□□□ -0.18
TRIM28-207ENST00000597136 NT5EP21589 574 aa13.91□□□□□ -0.18
TRIM28-207ENST00000597136 SSTR4P31391 388 aa13.91□□□□□ -0.18
TRIM28-207ENST00000597136 GALNSP34059 522 aa13.91□□□□□ -0.18
TRIM28-207ENST00000597136 CLCN2P51788 898 aa13.91□□□□□ -0.18
TRIM28-207ENST00000597136 GAB1Q13480 694 aa13.91□□□□□ -0.18
TRIM28-207ENST00000597136 PRICKLE4Q2TBC4 344 aa13.91□□□□□ -0.18
TRIM28-207ENST00000597136 ZNF628Q5EBL2 1059 aa13.91□□□□□ -0.18
TRIM28-207ENST00000597136 IRAK1BP1Q5VVH5 260 aa13.91□□□□□ -0.18
TRIM28-207ENST00000597136 JMJD6Q6NYC1 403 aaPredicted RBP13.91□□□□□ -0.18
TRIM28-207ENST00000597136 C8orf82Q6P1X6 216 aaPredicted RBP13.91□□□□□ -0.18
TRIM28-207ENST00000597136 TMEM107Q6UX40 140 aa13.91□□□□□ -0.18
TRIM28-207ENST00000597136 TRIML2Q8N7C3 387 aa13.91□□□□□ -0.18
TRIM28-207ENST00000597136 LSM14AQ8ND56 463 aaKnown RBP13.91□□□□□ -0.18
TRIM28-207ENST00000597136 OR1N1Q8NGS0 311 aa13.91□□□□□ -0.18
TRIM28-207ENST00000597136 ZNF675Q8TD23 568 aa13.91□□□□□ -0.18
TRIM28-207ENST00000597136 KAT2AQ92830 837 aa13.91□□□□□ -0.18
TRIM28-207ENST00000597136 ELP4Q96EB1 424 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms