RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, human

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-222	ENST00000596378	CHRNE	Q04844	493 aa		21.33	■■□□□ 1.01
SRRM1-222	ENST00000596378	BHLHB9	Q6PI77	547 aa		21.33	■■□□□ 1.01
SRRM1-222	ENST00000596378	TUBA1A	Q71U36	451 aa		21.33	■■□□□ 1.01
SRRM1-222	ENST00000596378	VRK2	Q86Y07	508 aa		21.33	■■□□□ 1.01
SRRM1-222	ENST00000596378	ZCCHC10	Q8TBK6	192 aa		21.33	■■□□□ 1.01
SRRM1-222	ENST00000596378	MRPL38	Q96DV4	380 aa	Known RBP	21.33	■■□□□ 1.01
SRRM1-222	ENST00000596378	ELP4	Q96EB1	424 aa		21.33	■■□□□ 1.01
SRRM1-222	ENST00000596378	OR6C2	Q9NZP2	312 aa		21.33	■■□□□ 1.01
SRRM1-222	ENST00000596378	NDOR1	Q9UHB4	597 aa		21.33	■■□□□ 1.01
SRRM1-222	ENST00000596378	EMC8	O43402	210 aa		21.33	■■□□□ 1
SRRM1-222	ENST00000596378	DNAJB6	O75190	326 aa		21.33	■■□□□ 1
SRRM1-222	ENST00000596378	MAG	P20916	626 aa		21.33	■■□□□ 1
SRRM1-222	ENST00000596378	CTH	P32929	405 aa		21.33	■■□□□ 1
SRRM1-222	ENST00000596378	MPI	P34949	423 aa		21.33	■■□□□ 1
SRRM1-222	ENST00000596378	SHISA5	Q8N114	240 aa		21.33	■■□□□ 1
SRRM1-222	ENST00000596378	MORN4	Q8NDC4	146 aa		21.33	■■□□□ 1
SRRM1-222	ENST00000596378	SIMC1	Q8NDZ2	872 aa		21.33	■■□□□ 1
SRRM1-222	ENST00000596378	C9orf43	Q8TAL5	461 aa	Predicted RBP	21.33	■■□□□ 1
SRRM1-222	ENST00000596378	SRMS	Q9H3Y6	488 aa		21.33	■■□□□ 1
SRRM1-222	ENST00000596378	POLE4	Q9NR33	117 aa		21.33	■■□□□ 1
SRRM1-222	ENST00000596378	KLF15	Q9UIH9	416 aa		21.33	■■□□□ 1
SRRM1-222	ENST00000596378	USP34	Q70CQ2	3546 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	PRKY	O43930	277 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	BCAP31	P51572	246 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	RAB15	P59190	212 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	PRR5	P85299	388 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	OXA1L	Q15070	435 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	SSX1	Q16384	188 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	FAM92B	Q6ZTR7	304 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	C11orf74	Q86VG3	221 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	SRFBP1	Q8NEF9	429 aa	Known RBP	21.32	■■□□□ 1
SRRM1-222	ENST00000596378	COL26A1	Q96A83	441 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	BMF	Q96LC9	184 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	SPATA5L1	Q9BVQ7	753 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	MRO	Q9BYG7	248 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	SLC38A1	Q9H2H9	487 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	POLM	Q9NP87	494 aa	Predicted RBP	21.32	■■□□□ 1
SRRM1-222	ENST00000596378	TMEM74B	Q9NUR3	256 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378		A0A0G2JPF8	293 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	HNRNPCL2	B2RXH8	293 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	HNRNPCL3	B7ZW38	293 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	ARHGAP33	O14559	1287 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	RASGRP1	O95267	797 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	HNRNPCL4	P0DMR1	293 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	MAGEA10	P43363	369 aa	Predicted RBP	21.32	■■□□□ 1
SRRM1-222	ENST00000596378	LIMK1	P53667	647 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	HOXC5	Q00444	222 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	ZNF91	Q05481	1191 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	DNASE1L3	Q13609	305 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	NFATC4	Q14934	902 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	ZNF311	Q5JNZ3	666 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	C6orf132	Q5T0Z8	1188 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	FAM111B	Q6SJ93	734 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	KIAA1324	Q6UXG2	1013 aa	Known RBP	21.32	■■□□□ 1
SRRM1-222	ENST00000596378	MTSS1L	Q765P7	747 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	PRRC1	Q96M27	445 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	CDADC1	Q9BWV3	514 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	GIMAP4	Q9NUV9	329 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	ZNF780B	Q9Y6R6	833 aa		21.32	■■□□□ 1
SRRM1-222	ENST00000596378	FANCM	Q8IYD8	2048 aa		21.31	■■□□□ 1
SRRM1-222	ENST00000596378	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	21.31	■■□□□ 1
SRRM1-222	ENST00000596378	KPNA4	O00629	521 aa	Predicted RBP	21.31	■■□□□ 1
SRRM1-222	ENST00000596378	P2RX6	O15547	441 aa		21.31	■■□□□ 1
SRRM1-222	ENST00000596378	TLX2	O43763	284 aa	Predicted RBP	21.31	■■□□□ 1
SRRM1-222	ENST00000596378	SLITRK5	O94991	958 aa		21.31	■■□□□ 1
SRRM1-222	ENST00000596378	ZIC2	O95409	532 aa	Predicted RBP	21.31	■■□□□ 1
SRRM1-222	ENST00000596378	NR2F6	P10588	404 aa		21.31	■■□□□ 1
SRRM1-222	ENST00000596378	SOX3	P41225	446 aa		21.31	■■□□□ 1
SRRM1-222	ENST00000596378	OLR1	P78380	273 aa		21.31	■■□□□ 1
SRRM1-222	ENST00000596378	PRRT3	Q5FWE3	981 aa		21.31	■■□□□ 1
SRRM1-222	ENST00000596378	ACSM5	Q6NUN0	579 aa		21.31	■■□□□ 1
SRRM1-222	ENST00000596378	ATCAY	Q86WG3	371 aa		21.31	■■□□□ 1
SRRM1-222	ENST00000596378	NRROS	Q86YC3	692 aa		21.31	■■□□□ 1
SRRM1-222	ENST00000596378	OR4N5	Q8IXE1	308 aa		21.31	■■□□□ 1
SRRM1-222	ENST00000596378	SLC34A3	Q8N130	599 aa		21.31	■■□□□ 1
SRRM1-222	ENST00000596378	DOK4	Q8TEW6	326 aa		21.31	■■□□□ 1
SRRM1-222	ENST00000596378	TSSK6	Q9BXA6	273 aa		21.31	■■□□□ 1
SRRM1-222	ENST00000596378	PLA2G12A	Q9BZM1	189 aa		21.31	■■□□□ 1
SRRM1-222	ENST00000596378	S1PR5	Q9H228	398 aa		21.31	■■□□□ 1
SRRM1-222	ENST00000596378	SLC28A3	Q9HAS3	691 aa		21.31	■■□□□ 1
SRRM1-222	ENST00000596378	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		21.3	■■□□□ 1
SRRM1-222	ENST00000596378	FCMR	O60667	390 aa		21.3	■■□□□ 1
SRRM1-222	ENST00000596378	PIP	P12273	146 aa	Predicted RBP	21.3	■■□□□ 1
SRRM1-222	ENST00000596378	ANXA11	P50995	505 aa	Known RBP	21.3	■■□□□ 1
SRRM1-222	ENST00000596378	KIAA1024L	P59773	190 aa		21.3	■■□□□ 1
SRRM1-222	ENST00000596378	GINS1	Q14691	196 aa		21.3	■■□□□ 1
SRRM1-222	ENST00000596378	TMEM201	Q5SNT2	666 aa		21.3	■■□□□ 1
SRRM1-222	ENST00000596378	NIPAL1	Q6NVV3	410 aa		21.3	■■□□□ 1
SRRM1-222	ENST00000596378	FBXO42	Q6P3S6	717 aa		21.3	■■□□□ 1
SRRM1-222	ENST00000596378	PAQR6	Q6TCH4	344 aa		21.3	■■□□□ 1
SRRM1-222	ENST00000596378	ASPG	Q86U10	573 aa		21.3	■■□□□ 1
SRRM1-222	ENST00000596378	OR10G6	Q8NH81	332 aa		21.3	■■□□□ 1
SRRM1-222	ENST00000596378	PPP1R14B	Q96C90	147 aa		21.3	■■□□□ 1
SRRM1-222	ENST00000596378	GIMAP5	Q96F15	307 aa		21.3	■■□□□ 1
SRRM1-222	ENST00000596378	DACH2	Q96NX9	599 aa		21.3	■■□□□ 1
SRRM1-222	ENST00000596378	OPALIN	Q96PE5	141 aa		21.3	■■□□□ 1
SRRM1-222	ENST00000596378	PINK1	Q9BXM7	581 aa		21.3	■■□□□ 1
SRRM1-222	ENST00000596378	MMP27	Q9H306	513 aa		21.3	■■□□□ 1
SRRM1-222	ENST00000596378	EGLN3	Q9H6Z9	239 aa		21.3	■■□□□ 1
SRRM1-222	ENST00000596378	CHST2	Q9Y4C5	530 aa		21.3	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms