RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 KLF7O75840 302 aaPredicted RBP13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 DDAH2O95865 285 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 IFNA16P05015 189 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 HEXBP07686 556 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 TFPTP0C1Z6 253 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 OR12D1P0DN82 309 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 ACP2P11117 423 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 SLC5A2P31639 672 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 PRIM2P49643 509 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 ANXA11P50995 505 aaKnown RBP13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 CDK6Q00534 326 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 RHDQ02161 417 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 FUT5Q11128 374 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 SCARB2Q14108 478 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 MTX3Q5HYI7 312 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 TMEM164Q5U3C3 297 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 HEPHL1Q6MZM0 1159 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 CCDC80Q76M96 950 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 TMPRSS7Q7RTY8 843 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 ANKRD37Q7Z713 158 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 SPPL2CQ8IUH8 684 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 SLC30A8Q8IWU4 369 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 ZNF615Q8N8J6 731 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 CDRT4Q8N9R6 151 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 OR7G1Q8NGA0 311 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 OR52R1Q8NGF1 315 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 OR5D16Q8NGK9 328 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 OR14A16Q8NHC5 309 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 FIG4Q92562 907 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 SLC35A4Q96G79 324 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 SENP5Q96HI0 755 aaPredicted RBP13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 FBXL20Q96IG2 436 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 NSMCE2Q96MF7 247 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 YIPF4Q9BSR8 244 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 LMF2Q9BU23 707 aaKnown RBP13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 GIN1Q9NXP7 522 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 C3orf18Q9UK00 162 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 PADI1Q9ULC6 663 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 ERVK-19Q9WJR5 959 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 KCNE3Q9Y6H6 103 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 EXPH5Q8NEV8 1989 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 FAM149AA5PLN7 773 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 NME6O75414 186 aaPredicted RBP13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 NKX2-2O95096 273 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 TNFSF15O95150 251 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 STAMBPO95630 424 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 IGKV3-11P04433 115 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 UMODP07911 640 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 RAB40ALP0C0E4 278 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 TNNI3P19429 210 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 SSTR4P31391 388 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 EMDP50402 254 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 GPR143P51810 404 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 CRYBA2P53672 197 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 PCBP3P57721 371 aaKnown RBP13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 AAGABQ6PD74 315 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 IGF2-ASQ6U949 168 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 MARCH9Q86YJ5 346 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 GALNT15Q8N3T1 639 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 SLC16A11Q8NCK7 471 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 HIPK4Q8NE63 616 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 NFKBIDQ8NI38 313 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 ZNF721Q8TF20 911 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 SLC38A5Q8WUX1 472 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 LRGUKQ96M69 825 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 VSTM2LQ96N03 204 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 WDR77Q9BQA1 342 aaPredicted RBP13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 CNPPD1Q9BV87 410 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 POLR1BQ9H9Y6 1135 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 FOLH1BQ9HBA9 442 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 EQTNQ9NQ60 294 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 OLAHQ9NV23 265 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 CDV3Q9UKY7 258 aaKnown RBP13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 PPIEQ9UNP9 301 aaKnown RBP13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 ZNF451Q9Y4E5 1061 aa13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 HEMK1Q9Y5R4 338 aaPredicted RBP13.72□□□□□ -0.21
SHKBP1-211ENST00000595945 LOC102723996A0A087X1L8 192 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 TTC36A6NLP5 189 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 DUXAA6NLW8 204 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 A8MUA0 341 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 TERTO14746 1132 aaKnown RBP13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 PRAMEF2O60811 474 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 FKBP6O75344 327 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 KRT36O76013 467 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 AGR2O95994 175 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 CD63P08962 238 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 CCNYL3P0C7X3 344 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 KDELR2P33947 212 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 ERFP50548 548 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 PGDP52209 483 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 SLC37A1P57057 533 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 SYPL1Q16563 259 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 DUSP5Q16690 384 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 SFT2D3Q587I9 215 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 PRAMEF8Q5VWM4 474 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 PRAMEF7Q5VXH5 474 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 REEP3Q6NUK4 255 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 SPATA24Q86W54 205 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 C10orf67Q8IYJ2 551 aa13.71□□□□□ -0.21
SHKBP1-211ENST00000595945 ADGRG5Q8IZF4 528 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms