RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 AMDHD1Q96NU7 426 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 TSSK3Q96PN8 268 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 FAM173AQ9BQD7 235 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 TTTY12Q9BZ98 90 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 GLIPR2Q9H4G4 154 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 TMBIM4Q9HC24 238 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 KCNK9Q9NPC2 374 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 MIEF1Q9NQG6 463 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 PFDN4Q9NQP4 134 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 PLSCR2Q9NRY7 297 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 TUBA8Q9NY65 449 aaPredicted RBP10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 BAIAP2L1Q9UHR4 511 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 ENTPD4Q9Y227 616 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 WBP11Q9Y2W2 641 aaKnown RBP10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 NPFFR2Q9Y5X5 522 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 DCHS2Q6V1P9 2916 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 TMEM120BA0PK00 339 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 LRRC3CA6NJW4 275 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 FAM166BA8MTA8 275 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 TFECO14948 347 aaPredicted RBP10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 PLOD3O60568 738 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 SLC19A2O60779 497 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 TBX19O60806 448 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 PEX11AO75192 247 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 PSMG1O95456 288 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 HSPA4LO95757 839 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 P04436 131 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 MC3RP41968 323 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 NCBP2P52298 156 aaKnown RBP eCLIP10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 ABCE1P61221 599 aaKnown RBP10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 MAGOHP61326 146 aaKnown RBP10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 PDE7AQ13946 482 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 RPS6KA2Q15349 733 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 C3AR1Q16581 482 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 HYAL4Q2M3T9 481 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 C6orf136Q5SQH8 315 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 HLA-DQA1Q5Y7H0 255 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 SLC22A10Q63ZE4 541 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 BICRALQ6AI39 1079 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 NPSR1Q6W5P4 371 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 Q6ZPB1 254 aaPredicted RBP10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 GK5Q6ZS86 529 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 FAM47EQ6ZV65 393 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 DND1Q8IYX4 353 aaKnown RBP10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 TAGAPQ8N103 731 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 GHDCQ8N2G8 530 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 FBXW8Q8N3Y1 598 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 ANKRD42Q8N9B4 389 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 FAM13CQ8NE31 585 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 PPP1R14CQ8TAE6 165 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 RELTQ969Z4 430 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 CIDECQ96AQ7 238 aaPredicted RBP10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 NTNG2Q96CW9 530 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 LCORQ96JN0 433 aaPredicted RBP10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 BBS4Q96RK4 519 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 ZDHHC11Q9H8X9 412 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 GIMAP4Q9NUV9 329 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 HAO1Q9UJM8 370 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 TINAGQ9UJW2 476 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 GPR55Q9Y2T6 319 aaPredicted RBP10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 TMED5Q9Y3A6 229 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 LIPGQ9Y5X9 500 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 TEX15Q9BXT5 2789 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 ABCA12Q86UK0 2595 aa10.1□□□□□ -0.79
SHKBP1-206ENST00000595523 A0A1B0GTH9 108 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 TO15178 435 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 AKAP10O43572 662 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 PPM1BO75688 479 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 ABCB1P08183 1280 aaPredicted RBP10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 CELA3AP09093 270 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 RFPL3SP0C7P2 107 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 CT45A8P0DMV1 189 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 CT45A9P0DMV2 189 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 DRD5P21918 477 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 MPIP34949 423 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 FRKP42685 505 aaPredicted RBP10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 CA7P43166 264 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 MAGEA5P43359 124 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 PPICP45877 212 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 SLC1A6P48664 564 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 CORO7P57737 925 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 PPIAP62937 165 aaKnown RBP10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 BST1Q10588 318 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 PTGR1Q14914 329 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 CT45A2Q5DJT8 189 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 FNDC7Q5VTL7 733 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 TMEM107Q6UX40 140 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 BNC2Q6ZN30 1099 aaPredicted RBP10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 ZNF551Q7Z340 670 aaPredicted RBP10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 FJX1Q86VR8 437 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 SPPL2CQ8IUH8 684 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 HOMEZQ8IX15 550 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 TMEM251Q8N6I4 163 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 SPPL2AQ8TCT8 520 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 NUDT8Q8WV74 236 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 HGDQ93099 445 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 ARL8AQ96BM9 186 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 OMA1Q96E52 524 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 HSPBAP1Q96EW2 488 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 PPP3R2Q96LZ3 170 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms