RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 EPGNQ6UW88 154 aa23.79■■□□□ 1.4
TRIM28-204ENST00000594806 TMEM107Q6UX40 140 aa23.79■■□□□ 1.4
TRIM28-204ENST00000594806 LYPD8Q6UX82 237 aa23.79■■□□□ 1.4
TRIM28-204ENST00000594806 ZNF551Q7Z340 670 aaPredicted RBP23.79■■□□□ 1.4
TRIM28-204ENST00000594806 GALNTL5Q7Z4T8 443 aa23.79■■□□□ 1.4
TRIM28-204ENST00000594806 KRTCAP2Q8N6L1 136 aa23.79■■□□□ 1.4
TRIM28-204ENST00000594806 PSD4Q8NDX1 1056 aa23.79■■□□□ 1.4
TRIM28-204ENST00000594806 AIG1Q9NVV5 245 aa23.79■■□□□ 1.4
TRIM28-204ENST00000594806 NPFFR2Q9Y5X5 522 aa23.79■■□□□ 1.4
TRIM28-204ENST00000594806 SHANK1Q9Y566 2161 aa23.79■■□□□ 1.4
TRIM28-204ENST00000594806 GOLGA8QA0A0J9YX86 632 aa23.78■■□□□ 1.4
TRIM28-204ENST00000594806 GOLGA8OA6NCC3 632 aa23.78■■□□□ 1.4
TRIM28-204ENST00000594806 FRG2CA6NGY1 282 aa23.78■■□□□ 1.4
TRIM28-204ENST00000594806 GOLGA8NF8WBI6 632 aa23.78■■□□□ 1.4
TRIM28-204ENST00000594806 ZNF354AO60765 605 aaPredicted RBP23.78■■□□□ 1.4
TRIM28-204ENST00000594806 FOXK1P85037 733 aa23.78■■□□□ 1.4
TRIM28-204ENST00000594806 HSPB3Q12988 150 aa23.78■■□□□ 1.4
TRIM28-204ENST00000594806 SLC9B1Q4ZJI4 515 aa23.78■■□□□ 1.4
TRIM28-204ENST00000594806 NXNQ6DKJ4 435 aa23.78■■□□□ 1.4
TRIM28-204ENST00000594806 ACAD11Q709F0 780 aa23.78■■□□□ 1.4
TRIM28-204ENST00000594806 MAVSQ7Z434 540 aa23.78■■□□□ 1.4
TRIM28-204ENST00000594806 ATCAYQ86WG3 371 aa23.78■■□□□ 1.4
TRIM28-204ENST00000594806 POGLUT1Q8NBL1 392 aa23.78■■□□□ 1.4
TRIM28-204ENST00000594806 FAR1Q8WVX9 515 aa23.78■■□□□ 1.4
TRIM28-204ENST00000594806 TESCQ96BS2 214 aa23.78■■□□□ 1.4
TRIM28-204ENST00000594806 BTBD9Q96Q07 612 aa23.78■■□□□ 1.4
TRIM28-204ENST00000594806 DUSP26Q9BV47 211 aa23.78■■□□□ 1.4
TRIM28-204ENST00000594806 ITPAQ9BY32 194 aa23.78■■□□□ 1.4
TRIM28-204ENST00000594806 C3orf14Q9HBI5 128 aa23.78■■□□□ 1.4
TRIM28-204ENST00000594806 ASF1BQ9NVP2 202 aa23.78■■□□□ 1.4
TRIM28-204ENST00000594806 NTMQ9P121 344 aa23.78■■□□□ 1.4
TRIM28-204ENST00000594806 MAP10Q9P2G4 905 aa23.78■■□□□ 1.4
TRIM28-204ENST00000594806 GPR55Q9Y2T6 319 aaPredicted RBP23.78■■□□□ 1.4
TRIM28-204ENST00000594806 A0A1W2PRB8 838 aa23.77■■□□□ 1.4
TRIM28-204ENST00000594806 ASPDHA6ND91 283 aa23.77■■□□□ 1.4
TRIM28-204ENST00000594806 J3QKU1 62 aa23.77■■□□□ 1.4
TRIM28-204ENST00000594806 UPK1AO00322 258 aa23.77■■□□□ 1.4
TRIM28-204ENST00000594806 ANKRD28O15084 1053 aa23.77■■□□□ 1.4
TRIM28-204ENST00000594806 TO15178 435 aa23.77■■□□□ 1.4
TRIM28-204ENST00000594806 IDO1P14902 403 aa23.77■■□□□ 1.4
TRIM28-204ENST00000594806 NTRK2Q16620 822 aa23.77■■□□□ 1.4
TRIM28-204ENST00000594806 GALNT11Q8NCW6 608 aa23.77■■□□□ 1.4
TRIM28-204ENST00000594806 SIMC1Q8NDZ2 872 aa23.77■■□□□ 1.4
TRIM28-204ENST00000594806 OR8J2Q8NGG1 315 aa23.77■■□□□ 1.4
TRIM28-204ENST00000594806 GRHL3Q8TE85 626 aa23.77■■□□□ 1.4
TRIM28-204ENST00000594806 OR5P2Q8WZ92 322 aa23.77■■□□□ 1.4
TRIM28-204ENST00000594806 VSTM2LQ96N03 204 aa23.77■■□□□ 1.4
TRIM28-204ENST00000594806 NXF5Q9H1B4 397 aaKnown RBP23.77■■□□□ 1.4
TRIM28-204ENST00000594806 FOLH1BQ9HBA9 442 aa23.77■■□□□ 1.4
TRIM28-204ENST00000594806 DTX4Q9Y2E6 619 aa23.77■■□□□ 1.4
TRIM28-204ENST00000594806 NUP214P35658 2090 aaPredicted RBP23.77■■□□□ 1.4
TRIM28-204ENST00000594806 TP53I11O14683 189 aa23.76■■□□□ 1.39
TRIM28-204ENST00000594806 DIAPH2O60879 1101 aa23.76■■□□□ 1.39
TRIM28-204ENST00000594806 ERN1O75460 977 aaKnown RBP23.76■■□□□ 1.39
TRIM28-204ENST00000594806 PSMG1O95456 288 aa23.76■■□□□ 1.39
TRIM28-204ENST00000594806 ALDOCP09972 364 aaKnown RBP23.76■■□□□ 1.39
TRIM28-204ENST00000594806 RPP38P78345 283 aaKnown RBP23.76■■□□□ 1.39
TRIM28-204ENST00000594806 RPS6KA2Q15349 733 aa23.76■■□□□ 1.39
TRIM28-204ENST00000594806 GSTA3Q16772 222 aa23.76■■□□□ 1.39
TRIM28-204ENST00000594806 PRR30Q53SZ7 412 aaPredicted RBP23.76■■□□□ 1.39
TRIM28-204ENST00000594806 SLC22A10Q63ZE4 541 aa23.76■■□□□ 1.39
TRIM28-204ENST00000594806 MDGA2Q7Z553 956 aa23.76■■□□□ 1.39
TRIM28-204ENST00000594806 PSMA8Q8TAA3 256 aa23.76■■□□□ 1.39
TRIM28-204ENST00000594806 STON2Q8WXE9 905 aa23.76■■□□□ 1.39
TRIM28-204ENST00000594806 TAAR6Q96RI8 345 aa23.76■■□□□ 1.39
TRIM28-204ENST00000594806 SECISBP2Q96T21 854 aaKnown RBP23.76■■□□□ 1.39
TRIM28-204ENST00000594806 HES7Q9BYE0 225 aa23.76■■□□□ 1.39
TRIM28-204ENST00000594806 NEUROD4Q9HD90 331 aa23.76■■□□□ 1.39
TRIM28-204ENST00000594806 SACM1LQ9NTJ5 587 aa23.76■■□□□ 1.39
TRIM28-204ENST00000594806 CNIH4Q9P003 139 aa23.76■■□□□ 1.39
TRIM28-204ENST00000594806 NTNG1Q9Y2I2 539 aa23.76■■□□□ 1.39
TRIM28-204ENST00000594806 GPR45Q9Y5Y3 372 aa23.76■■□□□ 1.39
TRIM28-204ENST00000594806 NBASA2RRP1 2371 aa23.76■■□□□ 1.39
TRIM28-204ENST00000594806 TCP11X1B4DZS4 312 aa23.75■■□□□ 1.39
TRIM28-204ENST00000594806 P04436 131 aa23.75■■□□□ 1.39
TRIM28-204ENST00000594806 PRR5P85299 388 aa23.75■■□□□ 1.39
TRIM28-204ENST00000594806 ZNHIT3Q15649 155 aaPredicted RBP23.75■■□□□ 1.39
TRIM28-204ENST00000594806 ANXA8L1Q5VT79 327 aa23.75■■□□□ 1.39
TRIM28-204ENST00000594806 FAM47EQ6ZV65 393 aa23.75■■□□□ 1.39
TRIM28-204ENST00000594806 GLB1L3Q8NCI6 653 aaPredicted RBP23.75■■□□□ 1.39
TRIM28-204ENST00000594806 VPS37AQ8NEZ2 397 aa23.75■■□□□ 1.39
TRIM28-204ENST00000594806 PAQR8Q8TEZ7 354 aa23.75■■□□□ 1.39
TRIM28-204ENST00000594806 SIKE1Q9BRV8 207 aa23.75■■□□□ 1.39
TRIM28-204ENST00000594806 CCDC28BQ9BUN5 200 aa23.75■■□□□ 1.39
TRIM28-204ENST00000594806 CLMPQ9H6B4 373 aa23.75■■□□□ 1.39
TRIM28-204ENST00000594806 ANKRA2Q9H9E1 313 aa23.75■■□□□ 1.39
TRIM28-204ENST00000594806 SH2D2AQ9NP31 389 aa23.75■■□□□ 1.39
TRIM28-204ENST00000594806 OLAHQ9NV23 265 aa23.75■■□□□ 1.39
TRIM28-204ENST00000594806 RP1L1Q8IWN7 2480 aaPredicted RBP23.75■■□□□ 1.39
TRIM28-204ENST00000594806 UBDO15205 165 aa23.74■■□□□ 1.39
TRIM28-204ENST00000594806 POLR3GO15318 223 aaPredicted RBP23.74■■□□□ 1.39
TRIM28-204ENST00000594806 EMC8O43402 210 aa23.74■■□□□ 1.39
TRIM28-204ENST00000594806 PEX1O43933 1283 aa23.74■■□□□ 1.39
TRIM28-204ENST00000594806 CT45A8P0DMV1 189 aa23.74■■□□□ 1.39
TRIM28-204ENST00000594806 CT45A9P0DMV2 189 aa23.74■■□□□ 1.39
TRIM28-204ENST00000594806 CNR1P21554 472 aa23.74■■□□□ 1.39
TRIM28-204ENST00000594806 ABCD3P28288 659 aa23.74■■□□□ 1.39
TRIM28-204ENST00000594806 KIR3DL1P43629 444 aa23.74■■□□□ 1.39
TRIM28-204ENST00000594806 PGS1Q32NB8 556 aa23.74■■□□□ 1.39
TRIM28-204ENST00000594806 PDCD4Q53EL6 469 aaKnown RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms