RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 IGFL3Q6UXB1 125 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 C9orf40Q8IXQ3 194 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 TAGAPQ8N103 731 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 OR4A15Q8NGL6 344 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 OR9I1Q8NGQ6 314 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 GOT1L1Q8NHS2 421 aaPredicted RBP18.15■□□□□ 0.5
CIRBP-220ENST00000588917 C9orf43Q8TAL5 461 aaPredicted RBP18.15■□□□□ 0.5
CIRBP-220ENST00000588917 SPDL1Q96EA4 605 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 ITCHQ96J02 903 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 MAGED4Q96JG8 741 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 PANX1Q96RD7 426 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 WWTR1Q9GZV5 400 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 RNF32Q9H0A6 362 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 HEMK1Q9Y5R4 338 aaPredicted RBP18.15■□□□□ 0.5
CIRBP-220ENST00000588917 SNX8Q9Y5X2 465 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 CPSF4O95639 269 aaKnown RBP18.14■□□□□ 0.49
CIRBP-220ENST00000588917 FAM87AP0C7U9 286 aa18.14■□□□□ 0.49
CIRBP-220ENST00000588917 DRD5P21918 477 aa18.14■□□□□ 0.49
CIRBP-220ENST00000588917 PTGER1P34995 402 aa18.14■□□□□ 0.49
CIRBP-220ENST00000588917 SOX18P35713 384 aa18.14■□□□□ 0.49
CIRBP-220ENST00000588917 PPICP45877 212 aa18.14■□□□□ 0.49
CIRBP-220ENST00000588917 CDK9P50750 372 aaKnown RBP18.14■□□□□ 0.49
CIRBP-220ENST00000588917 NRG3P56975 720 aa18.14■□□□□ 0.49
CIRBP-220ENST00000588917 MAPRE2Q15555 327 aa18.14■□□□□ 0.49
CIRBP-220ENST00000588917 VPS26BQ4G0F5 336 aa18.14■□□□□ 0.49
CIRBP-220ENST00000588917 PIGGQ5H8A4 983 aa18.14■□□□□ 0.49
CIRBP-220ENST00000588917 GKAP1Q5VSY0 366 aaPredicted RBP18.14■□□□□ 0.49
CIRBP-220ENST00000588917 B3GNTL1Q67FW5 361 aaPredicted RBP18.14■□□□□ 0.49
CIRBP-220ENST00000588917 LINC00696Q6ZRV3 163 aa18.14■□□□□ 0.49
CIRBP-220ENST00000588917 FUNDC1Q8IVP5 155 aa18.14■□□□□ 0.49
CIRBP-220ENST00000588917 ZADH2Q8N4Q0 377 aa18.14■□□□□ 0.49
CIRBP-220ENST00000588917 HORMAD2Q8N7B1 307 aa18.14■□□□□ 0.49
CIRBP-220ENST00000588917 NUP43Q8NFH3 380 aa18.14■□□□□ 0.49
CIRBP-220ENST00000588917 OR56A1Q8NGH5 318 aa18.14■□□□□ 0.49
CIRBP-220ENST00000588917 DNAJB8Q8NHS0 232 aa18.14■□□□□ 0.49
CIRBP-220ENST00000588917 SLC22A8Q8TCC7 542 aa18.14■□□□□ 0.49
CIRBP-220ENST00000588917 SFXN5Q8TD22 340 aa18.14■□□□□ 0.49
CIRBP-220ENST00000588917 THAP3Q8WTV1 239 aaPredicted RBP18.14■□□□□ 0.49
CIRBP-220ENST00000588917 HAS2Q92819 552 aa18.14■□□□□ 0.49
CIRBP-220ENST00000588917 SAR1AQ9NR31 198 aa18.14■□□□□ 0.49
CIRBP-220ENST00000588917 ARL2BPQ9Y2Y0 163 aa18.14■□□□□ 0.49
CIRBP-220ENST00000588917 A0A1W2PP18 115 aa18.13■□□□□ 0.49
CIRBP-220ENST00000588917 TMEM200CA6NKL6 621 aa18.13■□□□□ 0.49
CIRBP-220ENST00000588917 CAPN14A8MX76 684 aa18.13■□□□□ 0.49
CIRBP-220ENST00000588917 RFXANKO14593 260 aa18.13■□□□□ 0.49
CIRBP-220ENST00000588917 DPM1O60762 260 aa18.13■□□□□ 0.49
CIRBP-220ENST00000588917 ITGA10O75578 1167 aa18.13■□□□□ 0.49
CIRBP-220ENST00000588917 ABCB1P08183 1280 aaPredicted RBP18.13■□□□□ 0.49
CIRBP-220ENST00000588917 SNRPB2P08579 225 aaKnown RBP18.13■□□□□ 0.49
CIRBP-220ENST00000588917 EFNA1P20827 205 aaPredicted RBP18.13■□□□□ 0.49
CIRBP-220ENST00000588917 UQCRC2P22695 453 aa18.13■□□□□ 0.49
CIRBP-220ENST00000588917 CASRP41180 1078 aa18.13■□□□□ 0.49
CIRBP-220ENST00000588917 ZFP36L2P47974 494 aaKnown RBP18.13■□□□□ 0.49
CIRBP-220ENST00000588917 TRPC1P48995 793 aa18.13■□□□□ 0.49
CIRBP-220ENST00000588917 PRIM2P49643 509 aa18.13■□□□□ 0.49
CIRBP-220ENST00000588917 SSR4P51571 173 aa18.13■□□□□ 0.49
CIRBP-220ENST00000588917 PRKAG1P54619 331 aa18.13■□□□□ 0.49
CIRBP-220ENST00000588917 OPN5Q6U736 354 aa18.13■□□□□ 0.49
CIRBP-220ENST00000588917 GPALPP1Q8IXQ4 340 aa18.13■□□□□ 0.49
CIRBP-220ENST00000588917 DND1Q8IYX4 353 aaKnown RBP18.13■□□□□ 0.49
CIRBP-220ENST00000588917 CLECL1Q8IZS7 167 aa18.13■□□□□ 0.49
CIRBP-220ENST00000588917 TMEM156Q8N614 296 aa18.13■□□□□ 0.49
CIRBP-220ENST00000588917 AMER2Q8N7J2 671 aa18.13■□□□□ 0.49
CIRBP-220ENST00000588917 FAM120BQ96EK7 910 aaKnown RBP18.13■□□□□ 0.49
CIRBP-220ENST00000588917 HSPBAP1Q96EW2 488 aa18.13■□□□□ 0.49
CIRBP-220ENST00000588917 LCORQ96JN0 433 aaPredicted RBP18.13■□□□□ 0.49
CIRBP-220ENST00000588917 GAL3ST4Q96RP7 486 aa18.13■□□□□ 0.49
CIRBP-220ENST00000588917 CXorf36Q9H7Y0 433 aa18.13■□□□□ 0.49
CIRBP-220ENST00000588917 SIRT3Q9NTG7 399 aaPredicted RBP18.13■□□□□ 0.49
CIRBP-220ENST00000588917 ZCCHC3Q9NUD5 404 aaKnown RBP18.13■□□□□ 0.49
CIRBP-220ENST00000588917 VPS4AQ9UN37 437 aa18.13■□□□□ 0.49
CIRBP-220ENST00000588917 C9JVG2 144 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 WWP2O00308 870 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 ACOX3O15254 700 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 SLC28A2O43868 658 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 PRKNO60260 465 aaPredicted RBP18.12■□□□□ 0.49
CIRBP-220ENST00000588917 OR2J2O76002 312 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 PSMG1O95456 288 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 ANP32DO95626 131 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 KRT16P08779 473 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 TRHRP34981 398 aaPredicted RBP18.12■□□□□ 0.49
CIRBP-220ENST00000588917 TP53BP2Q13625 1128 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 TIGD2Q4W5G0 525 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 LACTB2Q53H82 288 aaPredicted RBP18.12■□□□□ 0.49
CIRBP-220ENST00000588917 FCRLBQ6BAA4 426 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 ZNF621Q6ZSS3 439 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 ASB18Q6ZVZ8 466 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 SZRD1Q7Z422 152 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 ANKRD46Q86W74 232 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 CDRT4Q8N9R6 151 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 ADIPOR1Q96A54 375 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 VPS33AQ96AX1 596 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 MS4A4EQ96PG1 132 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 UTP23Q9BRU9 249 aaKnown RBP18.12■□□□□ 0.49
CIRBP-220ENST00000588917 SLC25A18Q9H1K4 315 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 FOLH1BQ9HBA9 442 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 GPR55Q9Y2T6 319 aaPredicted RBP18.12■□□□□ 0.49
CIRBP-220ENST00000588917 NDUFAF1Q9Y375 327 aa18.12■□□□□ 0.49
CIRBP-220ENST00000588917 CROCCQ5TZA2 2017 aa18.11■□□□□ 0.49
CIRBP-220ENST00000588917 NR5A2O00482 541 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms