RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 CCL7P80098 99 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 KCNC4Q03721 635 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 GK3PQ14409 553 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 PRAMEF8Q5VWM4 474 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 PRAMEF7Q5VXH5 474 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 UGT2A3Q6UWM9 527 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 C16orf62Q7Z3J2 963 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 ST13P4Q8IZP2 240 aaPredicted RBP18.57■□□□□ 0.56
TRIM47-204ENST00000587339 DHRSXQ8N5I4 330 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 CYGBQ8WWM9 190 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 CTHRC1Q96CG8 243 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 RBM18Q96H35 190 aaKnown RBP18.57■□□□□ 0.56
TRIM47-204ENST00000587339 BTBD2Q9BX70 525 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 FANCEQ9HB96 536 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 USE1Q9NZ43 259 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 DHCR7Q9UBM7 475 aaKnown RBP18.57■□□□□ 0.56
TRIM47-204ENST00000587339 DMDP11532 3685 aa18.56■□□□□ 0.56
TRIM47-204ENST00000587339 SPEGQ15772 3267 aa18.56■□□□□ 0.56
TRIM47-204ENST00000587339 ZNF749O43361 778 aa18.56■□□□□ 0.56
TRIM47-204ENST00000587339 IFNW1P05000 195 aa18.56■□□□□ 0.56
TRIM47-204ENST00000587339 RRM2P31350 389 aa18.56■□□□□ 0.56
TRIM47-204ENST00000587339 KCNJ5P48544 419 aa18.56■□□□□ 0.56
TRIM47-204ENST00000587339 CHN2P52757 468 aa18.56■□□□□ 0.56
TRIM47-204ENST00000587339 MGAT2Q10469 447 aa18.56■□□□□ 0.56
TRIM47-204ENST00000587339 SLC36A3Q495N2 470 aa18.56■□□□□ 0.56
TRIM47-204ENST00000587339 OLIG3Q7RTU3 272 aa18.56■□□□□ 0.56
TRIM47-204ENST00000587339 CARM1Q86X55 608 aa18.56■□□□□ 0.56
TRIM47-204ENST00000587339 GPR32P1Q8NGA4 272 aa18.56■□□□□ 0.56
TRIM47-204ENST00000587339 SLC35A4Q96G79 324 aa18.56■□□□□ 0.56
TRIM47-204ENST00000587339 TRNT1Q96Q11 434 aaKnown RBP18.56■□□□□ 0.56
TRIM47-204ENST00000587339 SYNDIG1Q9H7V2 258 aa18.56■□□□□ 0.56
TRIM47-204ENST00000587339 GIN1Q9NXP7 522 aa18.56■□□□□ 0.56
TRIM47-204ENST00000587339 CALML5Q9NZT1 146 aa18.56■□□□□ 0.56
TRIM47-204ENST00000587339 FAM32AQ9Y421 112 aaKnown RBP18.56■□□□□ 0.56
TRIM47-204ENST00000587339 PCDHGB3Q9Y5G1 929 aa18.56■□□□□ 0.56
TRIM47-204ENST00000587339 ALBP02768 609 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 CT62P0C5K7 136 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 ATXN8OSP0DMR3 200 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 THRBP10828 461 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 HSD17B7P56937 341 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 BTG2P78543 158 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 DAB2P98082 770 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 PUM1Q14671 1186 aaKnown RBP eCLIP18.55■□□□□ 0.56
TRIM47-204ENST00000587339 LAPTM4AQ15012 233 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 PRAMEF17Q5VTA0 474 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 GALNT12Q8IXK2 581 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 VWA5B2Q8N398 1253 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 OR4D9Q8NGE8 314 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 ZNF501Q96CX3 271 aaPredicted RBP18.55■□□□□ 0.56
TRIM47-204ENST00000587339 NRBF2Q96F24 287 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 ZNF354BQ96LW1 612 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 RDH12Q96NR8 316 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 ALOXE3Q9BYJ1 711 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 AMBRA1Q9C0C7 1298 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 LRRN3Q9H3W5 708 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 CDC14AQ9UNH5 594 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 TESMINQ9Y4I5 508 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 PCDHGB5Q9Y5G0 923 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 FRYLO94915 3013 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 HS6ST1O60243 411 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 ANKRD34CP0C6C1 535 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 CKMT1AP12532 417 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 YAP1P46937 504 aaKnown RBP18.55■□□□□ 0.56
TRIM47-204ENST00000587339 OR1D4P47884 311 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 IGLV3-21P80748 117 aaPredicted RBP18.55■□□□□ 0.56
TRIM47-204ENST00000587339 HPCAP84074 193 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 BLMHQ13867 455 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 EXOSC7Q15024 291 aaKnown RBP18.55■□□□□ 0.56
TRIM47-204ENST00000587339 KRT80Q6KB66 452 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 HEPHL1Q6MZM0 1159 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 DGAT2L6Q6ZPD8 337 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 BMP8AQ7Z5Y6 402 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 APOBEC4Q8WW27 367 aaKnown RBP18.55■□□□□ 0.56
TRIM47-204ENST00000587339 CDS1Q92903 461 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 EPYCQ99645 322 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 YIPF2Q9BWQ6 316 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 RSPO3Q9BXY4 272 aaPredicted RBP18.55■□□□□ 0.56
TRIM47-204ENST00000587339 SMOC1Q9H4F8 434 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 CXorf21Q9HAI6 301 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 ENPP4Q9Y6X5 453 aa18.55■□□□□ 0.56
TRIM47-204ENST00000587339 TGFBR3LH3BV60 316 aa18.54■□□□□ 0.56
TRIM47-204ENST00000587339 DNAJB5O75953 348 aa18.54■□□□□ 0.56
TRIM47-204ENST00000587339 RECKO95980 971 aa18.54■□□□□ 0.56
TRIM47-204ENST00000587339 MAOAP21397 527 aa18.54■□□□□ 0.56
TRIM47-204ENST00000587339 CAPGP40121 348 aa18.54■□□□□ 0.56
TRIM47-204ENST00000587339 MPLP40238 635 aa18.54■□□□□ 0.56
TRIM47-204ENST00000587339 GCGRP47871 477 aa18.54■□□□□ 0.56
TRIM47-204ENST00000587339 MAP4K2Q12851 820 aa18.54■□□□□ 0.56
TRIM47-204ENST00000587339 DUSP5Q16690 384 aa18.54■□□□□ 0.56
TRIM47-204ENST00000587339 ZIK1Q3SY52 487 aaPredicted RBP18.54■□□□□ 0.56
TRIM47-204ENST00000587339 MLIPQ5VWP3 458 aa18.54■□□□□ 0.56
TRIM47-204ENST00000587339 ARHGAP22Q7Z5H3 698 aa18.54■□□□□ 0.56
TRIM47-204ENST00000587339 CDRT4Q8N9R6 151 aa18.54■□□□□ 0.56
TRIM47-204ENST00000587339 IFI44Q8TCB0 444 aa18.54■□□□□ 0.56
TRIM47-204ENST00000587339 RIT1Q92963 219 aa18.54■□□□□ 0.56
TRIM47-204ENST00000587339 BARD1Q99728 777 aaKnown RBP18.54■□□□□ 0.56
TRIM47-204ENST00000587339 GABARAPL1Q9H0R8 117 aa18.54■□□□□ 0.56
TRIM47-204ENST00000587339 SLC38A1Q9H2H9 487 aa18.54■□□□□ 0.56
TRIM47-204ENST00000587339 PIGUQ9H490 435 aa18.54■□□□□ 0.56
TRIM47-204ENST00000587339 PDP1Q9P0J1 537 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms