RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 ZIM3Q96PE6 472 aa16.4■□□□□ 0.22
ERBB2-221ENST00000584888 SPOCK3Q9BQ16 436 aa16.4■□□□□ 0.22
ERBB2-221ENST00000584888 ZDHHC11Q9H8X9 412 aa16.4■□□□□ 0.22
ERBB2-221ENST00000584888 SSU72Q9NP77 194 aaKnown RBP16.4■□□□□ 0.22
ERBB2-221ENST00000584888 CNOT11Q9UKZ1 510 aaKnown RBP16.4■□□□□ 0.22
ERBB2-221ENST00000584888 TRAF6Q9Y4K3 522 aa16.4■□□□□ 0.22
ERBB2-221ENST00000584888 CSMD1Q96PZ7 3565 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 FAM166BA8MTA8 275 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 MYO1GB0I1T2 1018 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 G3V3Y1 287 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 RGS16O15492 202 aaPredicted RBP16.39■□□□□ 0.21
ERBB2-221ENST00000584888 CTIFO43310 598 aaKnown RBP16.39■□□□□ 0.21
ERBB2-221ENST00000584888 P04436 131 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 PCSK2P16519 638 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 SSTR2P30874 369 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 SERPINB5P36952 375 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 EXOSC7Q15024 291 aaKnown RBP16.39■□□□□ 0.21
ERBB2-221ENST00000584888 C6orf163Q5TEZ5 329 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 CES4AQ5XG92 561 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 TMEM211Q6ICI0 200 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 PAOXQ6QHF9 649 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 TMEM64Q6YI46 380 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 RGS9BPQ6ZS82 235 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 ZCCHC23Q6ZST2 131 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 CLYBLQ8N0X4 340 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 TAGAPQ8N103 731 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 FBXW8Q8N3Y1 598 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 OR10G3Q8NGC4 313 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 EXOSC8Q96B26 276 aaKnown RBP16.39■□□□□ 0.21
ERBB2-221ENST00000584888 ERP27Q96DN0 273 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 TTTY12Q9BZ98 90 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 BRINP2Q9C0B6 783 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 ENKD1Q9H0I2 346 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 NXF5Q9H1B4 397 aaKnown RBP16.39■□□□□ 0.21
ERBB2-221ENST00000584888 TP63Q9H3D4 680 aaPredicted RBP16.39■□□□□ 0.21
ERBB2-221ENST00000584888 IL1RL2Q9HB29 575 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 LRTM1Q9HBL6 345 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 C1orf109Q9NX04 203 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 TUBA8Q9NY65 449 aaPredicted RBP16.39■□□□□ 0.21
ERBB2-221ENST00000584888 CNIH4Q9P003 139 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 POLR3HQ9Y535 204 aaPredicted RBP16.39■□□□□ 0.21
ERBB2-221ENST00000584888 NPFFR2Q9Y5X5 522 aa16.39■□□□□ 0.21
ERBB2-221ENST00000584888 ANKRD33BA6NCL7 494 aa16.38■□□□□ 0.21
ERBB2-221ENST00000584888 TMEM233B4DJY2 109 aa16.38■□□□□ 0.21
ERBB2-221ENST00000584888 ACOT7O00154 380 aa16.38■□□□□ 0.21
ERBB2-221ENST00000584888 RGS14O43566 566 aa16.38■□□□□ 0.21
ERBB2-221ENST00000584888 SEC22BO75396 215 aa16.38■□□□□ 0.21
ERBB2-221ENST00000584888 DHRS4L1P0CG22 281 aa16.38■□□□□ 0.21
ERBB2-221ENST00000584888 TACR1P25103 407 aa16.38■□□□□ 0.21
ERBB2-221ENST00000584888 PIGAP37287 484 aa16.38■□□□□ 0.21
ERBB2-221ENST00000584888 DNASE1L1P49184 302 aa16.38■□□□□ 0.21
ERBB2-221ENST00000584888 MRPS35P82673 323 aaKnown RBP16.38■□□□□ 0.21
ERBB2-221ENST00000584888 EMC4Q5J8M3 183 aa16.38■□□□□ 0.21
ERBB2-221ENST00000584888 HLA-DQA1Q5Y7H0 255 aa16.38■□□□□ 0.21
ERBB2-221ENST00000584888 GK5Q6ZS86 529 aa16.38■□□□□ 0.21
ERBB2-221ENST00000584888 FAM47EQ6ZV65 393 aa16.38■□□□□ 0.21
ERBB2-221ENST00000584888 SLC22A16Q86VW1 577 aa16.38■□□□□ 0.21
ERBB2-221ENST00000584888 ACBD4Q8NC06 268 aa16.38■□□□□ 0.21
ERBB2-221ENST00000584888 EGLN2Q96KS0 407 aa16.38■□□□□ 0.21
ERBB2-221ENST00000584888 EML4Q9HC35 981 aaKnown RBP16.38■□□□□ 0.21
ERBB2-221ENST00000584888 CFL2Q9Y281 166 aa16.38■□□□□ 0.21
ERBB2-221ENST00000584888 ACTL7BQ9Y614 415 aa16.38■□□□□ 0.21
ERBB2-221ENST00000584888 NPIPA2E9PIF3 369 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 NPIPA3F8WFD2 350 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 LSM1O15116 133 aaKnown RBP16.37■□□□□ 0.21
ERBB2-221ENST00000584888 PLOD3O60568 738 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 BCAS2O75934 225 aaPredicted RBP16.37■□□□□ 0.21
ERBB2-221ENST00000584888 IGHG3P01860 377 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 LINC00032P0C843 101 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 NEFHP12036 1026 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 NAGAP17050 411 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 DRD5P21918 477 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 PPICP45877 212 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 MPP2Q14168 576 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 GXYLT1Q4G148 440 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 CEP85LQ5SZL2 805 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 LRIG3Q6UXM1 1119 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 IKBIPQ70UQ0 350 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 RPRMLQ8N4K4 120 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 TMEM251Q8N6I4 163 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 OR52R1Q8NGF1 315 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 OR9A2Q8NGT5 310 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 RND1Q92730 232 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 HSPBAP1Q96EW2 488 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 C14orf79Q96F83 325 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 PGM2Q96G03 612 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 ZNF764Q96H86 408 aaPredicted RBP16.37■□□□□ 0.21
ERBB2-221ENST00000584888 LCORQ96JN0 433 aaPredicted RBP16.37■□□□□ 0.21
ERBB2-221ENST00000584888 SECISBP2Q96T21 854 aaKnown RBP16.37■□□□□ 0.21
ERBB2-221ENST00000584888 ITPAQ9BY32 194 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 BCAP29Q9UHQ4 241 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 ZDHHC2Q9UIJ5 367 aa16.37■□□□□ 0.21
ERBB2-221ENST00000584888 GPR55Q9Y2T6 319 aaPredicted RBP16.37■□□□□ 0.21
ERBB2-221ENST00000584888 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.37■□□□□ 0.21
ERBB2-221ENST00000584888 PDZD2O15018 2839 aa16.36■□□□□ 0.21
ERBB2-221ENST00000584888 CAPN14A8MX76 684 aa16.36■□□□□ 0.21
ERBB2-221ENST00000584888 TO15178 435 aa16.36■□□□□ 0.21
ERBB2-221ENST00000584888 TBX19O60806 448 aa16.36■□□□□ 0.21
ERBB2-221ENST00000584888 TRIM3O75382 744 aaPredicted RBP16.36■□□□□ 0.21
ERBB2-221ENST00000584888 ABCB1P08183 1280 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms