RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 IL17BQ9UHF5 180 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 PPIEQ9UNP9 301 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 ERVK-19Q9WJR5 959 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 C15orf38-AP3S2A0A0A6YYH1 394 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 A0A1W2PQ72 361 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 EVPLLA8MZ36 301 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 GSC2O15499 205 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 PSMG1O95456 288 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 CLPSP04118 112 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 IGKV3-11P04433 115 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 GPX2P18283 190 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 SSTR4P31391 388 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 MVDP53602 400 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 MTPNP58546 118 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 CXADRP78310 365 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 VAC14Q08AM6 782 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 DUSP8Q13202 625 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 EXOSC7Q15024 291 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 PCOLCEQ15113 449 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 RABL3Q5HYI8 236 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 PPP1R32Q7Z5V6 425 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 ARPINQ7Z6K5 226 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 ZNF605Q86T29 641 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 ZNF615Q8N8J6 731 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 OR52R1Q8NGF1 315 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 OR52N2Q8NGI0 321 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 OR1N1Q8NGS0 311 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 SLC2A12Q8TD20 617 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 KIAA1143Q96AT1 154 aaPredicted RBP15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 FBXL20Q96IG2 436 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 LPAR4Q99677 370 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 EFHD1Q9BUP0 239 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 THUMPD3Q9BV44 507 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 CNPPD1Q9BV87 410 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 TRIM8Q9BZR9 551 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 ZNF700Q9H0M5 742 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 OR10A5Q9H207 317 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 GPN2Q9H9Y4 310 aaPredicted RBP15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 DDX18Q9NVP1 670 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 ABCD2Q9UBJ2 740 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 AP3M1Q9Y2T2 418 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 MRPS18BQ9Y676 258 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 TENM4Q6N022 2769 aa15.22■□□□□ 0.03
CDK5RAP3-228ENST00000583363 IGHV1-45A0A0A0MS14 117 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 SAGE2PA6NJ88 616 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 CREG1O75629 220 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 DNAJC8O75937 253 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 LIFP15018 202 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 MATN1P21941 496 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 OTX2P32243 289 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 SLC7A2P52569 658 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 EEF1A2Q05639 463 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 CLN3Q13286 438 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 TP53BP2Q13625 1128 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 RGNQ15493 299 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 ZCCHC12Q6PEW1 402 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 PAPD4Q6PIY7 484 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 RNF130Q86XS8 419 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 ZNF321PQ8N8H1 164 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 C16orf58Q96GQ5 468 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 ART5Q96L15 291 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 NUDT9Q9BW91 350 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 CADM1Q9BY67 442 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 OR8D2Q9GZM6 311 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 RAD21L1Q9H4I0 556 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 KAT8Q9H7Z6 458 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 SPAG4Q9NPE6 437 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 BCAP29Q9UHQ4 241 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 CORO2BQ9UQ03 480 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 L3MBTL1Q9Y468 752 aa15.21■□□□□ 0.03
CDK5RAP3-228ENST00000583363 NME4O00746 187 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 COQ9O75208 318 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 NME6O75414 186 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 SEC24DO94855 1032 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 HMGN2P05204 90 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 COX6A1P12074 109 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 MAGEA8P43361 318 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 EMDP50402 254 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 GZMMP51124 257 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 CASP9P55211 416 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 SLC37A1P57057 533 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 EEFSECP57772 596 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 IL10RAQ13651 578 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 COX20Q5RI15 118 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 EXOSC6Q5RKV6 272 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 NDUFAF7Q7L592 441 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 C10orf111Q8N326 155 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 KIF2BQ8N4N8 673 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 AMER2Q8N7J2 671 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 B3GNT7Q8NFL0 401 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 OR11G2Q8NGC1 345 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 PNPT1Q8TCS8 783 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 MIPOL1Q8TD10 442 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ADAMTS17Q8TE56 1095 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 HOXB13Q92826 284 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 NAF1Q96HR8 494 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 SLC35G5Q96KT7 338 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 IMMP1LQ96LU5 166 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ZNF583Q96ND8 569 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms