RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 PCDHGB1Q9Y5G3 927 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 PCDHGA6Q9Y5G7 932 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 SCN3AQ9NY46 2000 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 PTGES3LE9PB15 166 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 FAM20BO75063 409 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 SEC14L2O76054 403 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 ADAP00813 363 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 CDH3P22223 829 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 AVPR2P30518 371 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 FASLGP48023 281 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 C21orf59P57076 290 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 SRSF5Q13243 272 aaKnown RBP21.26■□□□□ 0.99
CCDC47-204ENST00000582252 PLK5Q496M5 336 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 FGD3Q5JSP0 725 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 TCTN3Q6NUS6 607 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 C16orf62Q7Z3J2 963 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 SVOPQ8N4V2 548 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 LINC00471Q8N535 108 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 AQP11Q8NBQ7 271 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 VANGL1Q8TAA9 524 aaPredicted RBP21.26■□□□□ 0.99
CCDC47-204ENST00000582252 KAT2AQ92830 837 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 CCDC90BQ9GZT6 254 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 NMNAT1Q9HAN9 279 aaPredicted RBP21.26■□□□□ 0.99
CCDC47-204ENST00000582252 CACYBPQ9HB71 228 aaKnown RBP21.26■□□□□ 0.99
CCDC47-204ENST00000582252 EQTNQ9NQ60 294 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 GIN1Q9NXP7 522 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 SLC13A4Q9UKG4 626 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 ACAD8Q9UKU7 415 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 MGAT4BQ9UQ53 548 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 UGT2B17O75795 530 aa21.25■□□□□ 0.99
CCDC47-204ENST00000582252 ALPPP05187 535 aa21.25■□□□□ 0.99
CCDC47-204ENST00000582252 GNSP15586 552 aa21.25■□□□□ 0.99
CCDC47-204ENST00000582252 TYRP1P17643 537 aa21.25■□□□□ 0.99
CCDC47-204ENST00000582252 ITIH1P19827 911 aa21.25■□□□□ 0.99
CCDC47-204ENST00000582252 FMO3P31513 532 aa21.25■□□□□ 0.99
CCDC47-204ENST00000582252 SKP1P63208 163 aa21.25■□□□□ 0.99
CCDC47-204ENST00000582252 FUT5Q11128 374 aa21.25■□□□□ 0.99
CCDC47-204ENST00000582252 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.25■□□□□ 0.99
CCDC47-204ENST00000582252 XAF1Q6GPH4 301 aa21.25■□□□□ 0.99
CCDC47-204ENST00000582252 CDC73Q6P1J9 531 aa21.25■□□□□ 0.99
CCDC47-204ENST00000582252 COL26A1Q96A83 441 aa21.25■□□□□ 0.99
CCDC47-204ENST00000582252 C16orf58Q96GQ5 468 aa21.25■□□□□ 0.99
CCDC47-204ENST00000582252 CSF3RQ99062 836 aa21.25■□□□□ 0.99
CCDC47-204ENST00000582252 DOK1Q99704 481 aa21.25■□□□□ 0.99
CCDC47-204ENST00000582252 NIPSNAP1Q9BPW8 284 aa21.25■□□□□ 0.99
CCDC47-204ENST00000582252 DUSP21Q9H596 190 aa21.25■□□□□ 0.99
CCDC47-204ENST00000582252 RLIMQ9NVW2 624 aa21.25■□□□□ 0.99
CCDC47-204ENST00000582252 SUSD2Q9UGT4 822 aa21.25■□□□□ 0.99
CCDC47-204ENST00000582252 A0A1W2PS29 197 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 SYT5O00445 386 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 GALR3O60755 368 aaPredicted RBP21.24■□□□□ 0.99
CCDC47-204ENST00000582252 UBXN7O94888 489 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 LGI1O95970 557 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 IFI6P09912 130 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 CPMP14384 443 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 EPHA2P29317 976 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 PTGER1P34995 402 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 MAN2A2P49641 1150 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 MAPK10P53779 464 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 VSX2P58304 361 aaPredicted RBP21.24■□□□□ 0.99
CCDC47-204ENST00000582252 SIM1P81133 766 aaPredicted RBP21.24■□□□□ 0.99
CCDC47-204ENST00000582252 LTB4RQ15722 352 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 GPR107Q5VW38 600 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 ZNF761Q86XN6 746 aaPredicted RBP21.24■□□□□ 0.99
CCDC47-204ENST00000582252 SFTPA2Q8IWL1 248 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 ENTHD1Q8IYW4 607 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 SDR16C5Q8N3Y7 309 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 C19orf47Q8N9M1 422 aaKnown RBP21.24■□□□□ 0.99
CCDC47-204ENST00000582252 ZNF540Q8NDQ6 660 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 TANKQ92844 425 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 RHCGQ9UBD6 479 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 GOLGA4Q13439 2230 aaKnown RBP21.24■□□□□ 0.99
CCDC47-204ENST00000582252 DNAH14Q0VDD8 3507 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 TMEM131Q92545 1883 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 FFAR1O14842 300 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 HRO43593 1189 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 XPNPEP2O43895 674 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 ELAVL4P26378 380 aaKnown RBP21.24■□□□□ 0.99
CCDC47-204ENST00000582252 CSNK1EP49674 416 aaKnown RBP21.24■□□□□ 0.99
CCDC47-204ENST00000582252 TMBIM6P55061 237 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 SLC35A2P78381 396 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 FAM214AQ32MH5 1076 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 MFSD12Q6NUT3 480 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 NIPAL1Q6NVV3 410 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 OR2L13Q8N349 312 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 FAM81AQ8TBF8 368 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 LMX1AQ8TE12 382 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 C12orf43Q96C57 262 aaKnown RBP21.24■□□□□ 0.99
CCDC47-204ENST00000582252 GIMAP5Q96F15 307 aa21.24■□□□□ 0.99
CCDC47-204ENST00000582252 OTUB1Q96FW1 271 aaPredicted RBP21.24■□□□□ 0.99
CCDC47-204ENST00000582252 LILRA5A6NI73 299 aa21.23■□□□□ 0.99
CCDC47-204ENST00000582252 HTR1AP08908 422 aa21.23■□□□□ 0.99
CCDC47-204ENST00000582252 UGT2B15P54855 530 aa21.23■□□□□ 0.99
CCDC47-204ENST00000582252 MVKQ03426 396 aa21.23■□□□□ 0.99
CCDC47-204ENST00000582252 OR7G2Q8NG99 324 aa21.23■□□□□ 0.99
CCDC47-204ENST00000582252 MUL1Q969V5 352 aa21.23■□□□□ 0.99
CCDC47-204ENST00000582252 GTPBP3Q969Y2 492 aaKnown RBP21.23■□□□□ 0.99
CCDC47-204ENST00000582252 ZC3H10Q96K80 434 aaKnown RBP21.23■□□□□ 0.99
CCDC47-204ENST00000582252 FNDC11Q9BVV2 318 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms