RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 CIDECQ96AQ7 238 aaPredicted RBP11.54□□□□□ -0.56
CBX1-206ENST00000581003 OMA1Q96E52 524 aa11.54□□□□□ -0.56
CBX1-206ENST00000581003 C3orf30Q96M34 536 aa11.54□□□□□ -0.56
CBX1-206ENST00000581003 RILPQ96NA2 401 aa11.54□□□□□ -0.56
CBX1-206ENST00000581003 NODALQ96S42 347 aa11.54□□□□□ -0.56
CBX1-206ENST00000581003 DOHHQ9BU89 302 aa11.54□□□□□ -0.56
CBX1-206ENST00000581003 ROPN1BQ9BZX4 212 aaPredicted RBP11.54□□□□□ -0.56
CBX1-206ENST00000581003 ROPN1Q9HAT0 212 aaPredicted RBP11.54□□□□□ -0.56
CBX1-206ENST00000581003 LRTM1Q9HBL6 345 aa11.54□□□□□ -0.56
CBX1-206ENST00000581003 GALNT9Q9HCQ5 603 aa11.54□□□□□ -0.56
CBX1-206ENST00000581003 MYNNQ9NPC7 610 aa11.54□□□□□ -0.56
CBX1-206ENST00000581003 SUCOQ9UBS9 1254 aaKnown RBP11.54□□□□□ -0.56
CBX1-206ENST00000581003 BAIAP2L1Q9UHR4 511 aa11.54□□□□□ -0.56
CBX1-206ENST00000581003 ENTPD4Q9Y227 616 aa11.54□□□□□ -0.56
CBX1-206ENST00000581003 MAST4O15021 2626 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 MYO1GB0I1T2 1018 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 B4DXG7 233 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 PRRG2O14669 202 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 LSM1O15116 133 aaKnown RBP11.53□□□□□ -0.56
CBX1-206ENST00000581003 AKAP10O43572 662 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 ITM2AO43736 263 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 UGT2B11O75310 529 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 TRIM3O75382 744 aaPredicted RBP11.53□□□□□ -0.56
CBX1-206ENST00000581003 SEC22BO75396 215 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 SKAP2O75563 359 aaPredicted RBP11.53□□□□□ -0.56
CBX1-206ENST00000581003 BPGMP07738 259 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 ABCB1P08183 1280 aaPredicted RBP11.53□□□□□ -0.56
CBX1-206ENST00000581003 SNRPB2P08579 225 aaKnown RBP11.53□□□□□ -0.56
CBX1-206ENST00000581003 PTGDSP41222 190 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 NCBP2P52298 156 aaKnown RBP eCLIP11.53□□□□□ -0.56
CBX1-206ENST00000581003 CASP6P55212 293 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 PLCXD2Q0VAA5 305 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 HEPACAMQ14CZ8 416 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 CEBPEQ15744 281 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 HYAL4Q2M3T9 481 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.53□□□□□ -0.563e-7■■■■■ 31.4
CBX1-206ENST00000581003 GALNTL6Q49A17 601 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 SH2D4BQ5SQS7 431 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 ARHGAP11AQ6P4F7 1023 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 TRILQ7L0X0 811 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 EXOC3L1Q86VI1 746 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 DDIASQ8IXT1 998 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 C7orf57Q8NEG2 295 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 ZNF675Q8TD23 568 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 TWIST2Q8WVJ9 160 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 TMBIM1Q969X1 311 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 FCRL1Q96LA6 429 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 VSTM2LQ96N03 204 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 ZIM3Q96PE6 472 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 TSSK3Q96PN8 268 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 SMC6Q96SB8 1091 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 TMEM109Q9BVC6 243 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 GLIPR2Q9H4G4 154 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 FOLH1BQ9HBA9 442 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 ZFP64Q9NPA5 681 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 RRAGDQ9NQL2 400 aaPredicted RBP11.53□□□□□ -0.56
CBX1-206ENST00000581003 MID2Q9UJV3 735 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 PSME2Q9UL46 239 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 EXPH5Q8NEV8 1989 aa11.53□□□□□ -0.56
CBX1-206ENST00000581003 CRYBG3Q68DQ2 2970 aa11.52□□□□□ -0.56
CBX1-206ENST00000581003 FBN2P35556 2912 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 CELSR2Q9HCU4 2923 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 GNB5O14775 395 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 NPHS1O60500 1241 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 PPM1BO75688 479 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 IGHG3P01860 377 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 CT45A8P0DMV1 189 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 CT45A9P0DMV2 189 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 CASP3P42574 277 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 WNT3P56703 355 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 CT45A2Q5DJT8 189 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 CEP85LQ5SZL2 805 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 RTL6Q6ICC9 239 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 BNC2Q6ZN30 1099 aaPredicted RBP11.52□□□□□ -0.57
CBX1-206ENST00000581003 ZNF551Q7Z340 670 aaPredicted RBP11.52□□□□□ -0.57
CBX1-206ENST00000581003 FAM9CQ8IZT9 166 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 OR6Y1Q8NGX8 325 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 NTNG2Q96CW9 530 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 LCORQ96JN0 433 aaPredicted RBP11.52□□□□□ -0.57
CBX1-206ENST00000581003 AMDHD1Q96NU7 426 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 GNRHR2Q96P88 292 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 BBS4Q96RK4 519 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 ANGPTL4Q9BY76 406 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 CENPHQ9H3R5 247 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 MIEF1Q9NQG6 463 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 C1orf109Q9NX04 203 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 FLRT3Q9NZU0 649 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 CNIH4Q9P003 139 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 ZDHHC2Q9UIJ5 367 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 GPR55Q9Y2T6 319 aaPredicted RBP11.52□□□□□ -0.57
CBX1-206ENST00000581003 TRAF6Q9Y4K3 522 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 FAM215AQ9Y5M1 114 aa11.52□□□□□ -0.57
CBX1-206ENST00000581003 SPTBN1Q01082 2364 aaKnown RBP11.52□□□□□ -0.57
CBX1-206ENST00000581003 FRG2CA6NGY1 282 aa11.51□□□□□ -0.57
CBX1-206ENST00000581003 E9PLN8 166 aa11.51□□□□□ -0.57
CBX1-206ENST00000581003 SLC28A1O00337 649 aa11.51□□□□□ -0.57
CBX1-206ENST00000581003 RGS16O15492 202 aaPredicted RBP11.51□□□□□ -0.57
CBX1-206ENST00000581003 PRPH2P23942 346 aa11.51□□□□□ -0.57
CBX1-206ENST00000581003 GDF1P27539 372 aa11.51□□□□□ -0.57
CBX1-206ENST00000581003 HTR1EP28566 365 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms