RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 ZNHIT3Q15649 155 aaPredicted RBP10□□□□□ -0.81
SS18-213ENST00000579640 CYP51A1Q16850 503 aa10□□□□□ -0.81
SS18-213ENST00000579640 GCNT6Q5T4J0 391 aa10□□□□□ -0.81
SS18-213ENST00000579640 CDC73Q6P1J9 531 aa10□□□□□ -0.81
SS18-213ENST00000579640 RNF111Q6ZNA4 994 aa10□□□□□ -0.81
SS18-213ENST00000579640 NET1Q7Z628 596 aaPredicted RBP10□□□□□ -0.81
SS18-213ENST00000579640 ULK2Q8IYT8 1036 aa10□□□□□ -0.81
SS18-213ENST00000579640 LGI4Q8N135 537 aa10□□□□□ -0.81
SS18-213ENST00000579640 ZNF615Q8N8J6 731 aa10□□□□□ -0.81
SS18-213ENST00000579640 NFAM1Q8NET5 270 aaPredicted RBP10□□□□□ -0.81
SS18-213ENST00000579640 OR2T12Q8NG77 320 aa10□□□□□ -0.81
SS18-213ENST00000579640 ZNF721Q8TF20 911 aa10□□□□□ -0.81
SS18-213ENST00000579640 HOXB13Q92826 284 aaPredicted RBP10□□□□□ -0.81
SS18-213ENST00000579640 VMP1Q96GC9 406 aa10□□□□□ -0.81
SS18-213ENST00000579640 ZNF583Q96ND8 569 aa10□□□□□ -0.81
SS18-213ENST00000579640 STACQ99469 402 aa10□□□□□ -0.81
SS18-213ENST00000579640 KCTD14Q9BQ13 255 aaPredicted RBP10□□□□□ -0.81
SS18-213ENST00000579640 WDR77Q9BQA1 342 aaPredicted RBP10□□□□□ -0.81
SS18-213ENST00000579640 TRIM8Q9BZR9 551 aa10□□□□□ -0.81
SS18-213ENST00000579640 MUC13Q9H3R2 512 aa10□□□□□ -0.81
SS18-213ENST00000579640 PCDHGB3Q9Y5G1 929 aa10□□□□□ -0.81
SS18-213ENST00000579640 HEMK1Q9Y5R4 338 aaPredicted RBP10□□□□□ -0.81
SS18-213ENST00000579640 IGHV1-45A0A0A0MS14 117 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 TMEM247A6NEH6 219 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 HRKO00198 91 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 SOCS6O14544 535 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 TNFRSF21O75509 655 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 CLPSP04118 112 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 COX6A1P12074 109 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 F8A1P23610 371 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 HTR1EP28566 365 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 EMDP50402 254 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 GZMMP51124 257 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 GPR143P51810 404 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 SLC37A1P57057 533 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 SLC26A5P58743 744 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 DCAF7P61962 342 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 RPS18P62269 152 aaKnown RBP9.99□□□□□ -0.81
SS18-213ENST00000579640 EEF1A2Q05639 463 aaKnown RBP9.99□□□□□ -0.81
SS18-213ENST00000579640 RBBP4Q09028 425 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 ZNF155Q12901 538 aaPredicted RBP9.99□□□□□ -0.81
SS18-213ENST00000579640 DUSP8Q13202 625 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 PCOLCEQ15113 449 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 EXT1Q16394 746 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 COX20Q5RI15 118 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 EXOSC6Q5RKV6 272 aaKnown RBP9.99□□□□□ -0.81
SS18-213ENST00000579640 TNFAIP8L2Q6P589 184 aaPredicted RBP9.99□□□□□ -0.81
SS18-213ENST00000579640 NDUFAF7Q7L592 441 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 PPP1R32Q7Z5V6 425 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 SLC30A8Q8IWU4 369 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 METTL25Q8N6Q8 603 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 ADAMTS15Q8TE58 950 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 DOK4Q8TEW6 326 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 C8orf44Q96CB5 159 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 LMF2Q9BU23 707 aaKnown RBP9.99□□□□□ -0.81
SS18-213ENST00000579640 TMEM121BQ9BXQ6 578 aaPredicted RBP9.99□□□□□ -0.81
SS18-213ENST00000579640 SEMA4CQ9C0C4 833 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 OR51I1Q9H343 314 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 TMEM38AQ9H6F2 299 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 ANKRA2Q9H9E1 313 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 FOLH1BQ9HBA9 442 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 EQTNQ9NQ60 294 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 EXD2Q9NVH0 621 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 SUCOQ9UBS9 1254 aaKnown RBP9.99□□□□□ -0.81
SS18-213ENST00000579640 AHCTF1Q8WYP5 2266 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 SPEGQ15772 3267 aa9.99□□□□□ -0.81
SS18-213ENST00000579640 CACNA1AO00555 2505 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 IGHV3-20A0A0C4DH32 117 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 ELOVL7A1L3X0 281 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 CREG1O75629 220 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 CIB2O75838 187 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 PDE5AO76074 875 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 SEC24DO94855 1032 aaPredicted RBP9.98□□□□□ -0.81
SS18-213ENST00000579640 C1QCP02747 245 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 ALOX5P09917 674 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 ETFAP13804 333 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 OTX2P32243 289 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 MAN2A2P49641 1150 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 RPS26P62854 115 aaKnown RBP9.98□□□□□ -0.81
SS18-213ENST00000579640 KCNJ2P63252 427 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 PSPHP78330 225 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 GNA13Q14344 377 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 MYBPC3Q14896 1274 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 FXNQ16595 210 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 ZNF630Q2M218 657 aaPredicted RBP9.98□□□□□ -0.81
SS18-213ENST00000579640 ATAD3BQ5T9A4 648 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 FAM69BQ5VUD6 431 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 KIRREL2Q6UWL6 708 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 SLC29A4Q7RTT9 530 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 IFNEQ86WN2 208 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 MICU2Q8IYU8 434 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 HORMAD2Q8N7B1 307 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 RNF148Q8N7C7 305 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 C11orf65Q8NCR3 313 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 SIMC1Q8NDZ2 872 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 OR11G2Q8NGC1 345 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 OR8K3Q8NH51 312 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 C16orf52Q8NHV5 167 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 JADE3Q92613 823 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 FGF11Q92914 225 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms