RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 OLAHQ9NV23 265 aa12.77□□□□□ -0.37
CCDC40-209ENST00000573474 P2RX2Q9UBL9 471 aa12.77□□□□□ -0.37
CCDC40-209ENST00000573474 ZNF451Q9Y4E5 1061 aa12.77□□□□□ -0.37
CCDC40-209ENST00000573474 ZFHX2Q9C0A1 2572 aaPredicted RBP12.77□□□□□ -0.37
CCDC40-209ENST00000573474 SCN2AQ99250 2005 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 SEC16AO15027 2179 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 A0A1W2PNU3 283 aaPredicted RBP12.76□□□□□ -0.37
CCDC40-209ENST00000573474 DHRS12A0PJE2 317 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 PMS2P1A4D2B8 440 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 C17orf105B2RV13 164 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 IDSB3KWA1 339 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 H0Y3Z8 333 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 SLC28A2O43868 658 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 CD63P08962 238 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 NR2F1P10589 423 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 PSMA4P25789 261 aaKnown RBP12.76□□□□□ -0.37
CCDC40-209ENST00000573474 SLC7A1P30825 629 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 PGDP52209 483 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 EFNA3P52797 238 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 EMP2P54851 167 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 EXOSC6Q5RKV6 272 aaKnown RBP12.76□□□□□ -0.37
CCDC40-209ENST00000573474 ATAD3BQ5T9A4 648 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 IRAK1BP1Q5VVH5 260 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 C6orf15Q6UXA7 325 aaPredicted RBP12.76□□□□□ -0.37
CCDC40-209ENST00000573474 ZNF517Q6ZMY9 492 aaPredicted RBP12.76□□□□□ -0.37
CCDC40-209ENST00000573474 SHISA6Q6ZSJ9 500 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 ADGRG5Q8IZF4 528 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 CDRT4Q8N9R6 151 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 OR5D16Q8NGK9 328 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 SLC38A5Q8WUX1 472 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 METTL21AQ8WXB1 218 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 DAZLQ92904 295 aaKnown RBP12.76□□□□□ -0.37
CCDC40-209ENST00000573474 SLC35A4Q96G79 324 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 TMEM19Q96HH6 336 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 EFHD1Q9BUP0 239 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 CNPPD1Q9BV87 410 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 UGT2B28Q9BY64 529 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 B3GNT4Q9C0J1 378 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 SOX17Q9H6I2 414 aaPredicted RBP12.76□□□□□ -0.37
CCDC40-209ENST00000573474 AKIRIN1Q9H9L7 192 aaPredicted RBP12.76□□□□□ -0.37
CCDC40-209ENST00000573474 CCM2LQ9NUG4 571 aaPredicted RBP12.76□□□□□ -0.37
CCDC40-209ENST00000573474 EXD2Q9NVH0 621 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 GIN1Q9NXP7 522 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 STX18Q9P2W9 335 aaKnown RBP12.76□□□□□ -0.37
CCDC40-209ENST00000573474 ANAPC2Q9UJX6 822 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 C3orf18Q9UK00 162 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 RPS6KA6Q9UK32 745 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 LIPT1Q9Y234 373 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 AP4S1Q9Y587 144 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 PCDHGB3Q9Y5G1 929 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 CLCA3PQ9Y6N3 262 aa12.76□□□□□ -0.37
CCDC40-209ENST00000573474 A8MUA0 341 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 C9orf172C9J069 976 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 H3BNX3 289 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 SLC30A4O14863 429 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 ZNF292O60281 2723 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 PRAMEF2O60811 474 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 CNOT3O75175 753 aaKnown RBP12.75□□□□□ -0.37
CCDC40-209ENST00000573474 ALOX12BO75342 701 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 GCM2O75603 506 aaPredicted RBP12.75□□□□□ -0.37
CCDC40-209ENST00000573474 DLGAP3O95886 979 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 SERPINA1P01009 418 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 IFNA14P01570 189 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 BCHEP06276 602 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 ALOX5P09917 674 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 CCNYL3P0C7X3 344 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 ACP2P11117 423 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 HOXB6P17509 224 aaKnown RBP12.75□□□□□ -0.37
CCDC40-209ENST00000573474 SSTR4P31391 388 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 SLC5A2P31639 672 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 EMDP50402 254 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 CLCN2P51788 898 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 TARDBPQ13148 414 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCDC40-209ENST00000573474 DUSP8Q13202 625 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 ELOAQ14241 798 aaKnown RBP12.75□□□□□ -0.37
CCDC40-209ENST00000573474 LRRC23Q53EV4 343 aaPredicted RBP12.75□□□□□ -0.37
CCDC40-209ENST00000573474 CRB2Q5IJ48 1285 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 C3orf38Q5JPI3 329 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 NUP210LQ5VU65 1888 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 PRAMEF8Q5VWM4 474 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 PRAMEF7Q5VXH5 474 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 FAM199XQ6PEV8 388 aaPredicted RBP12.75□□□□□ -0.37
CCDC40-209ENST00000573474 FAM198BQ6UWH4 519 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 ANKRD37Q7Z713 158 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 PATL1Q86TB9 770 aaKnown RBP12.75□□□□□ -0.37
CCDC40-209ENST00000573474 SLC44A2Q8IWA5 706 aaPredicted RBP12.75□□□□□ -0.37
CCDC40-209ENST00000573474 OR14A16Q8NHC5 309 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 FBXO30Q8TB52 745 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 CANT1Q8WVQ1 401 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 SLC9A6Q92581 669 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 HOXB13Q92826 284 aaPredicted RBP12.75□□□□□ -0.37
CCDC40-209ENST00000573474 SENP5Q96HI0 755 aaPredicted RBP12.75□□□□□ -0.37
CCDC40-209ENST00000573474 FBXL20Q96IG2 436 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 ART5Q96L15 291 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 RNF145Q96MT1 663 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 STACQ99469 402 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 SPSB2Q99619 263 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 SPRY4Q9C004 299 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 OR10A5Q9H207 317 aa12.75□□□□□ -0.37
CCDC40-209ENST00000573474 PIGUQ9H490 435 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms