RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 OMA1Q96E52 524 aa16.54■□□□□ 0.24
CHD3-214ENST00000572579 WDYHV1Q96HA8 205 aa16.54■□□□□ 0.24
CHD3-214ENST00000572579 TMEM41AQ96HV5 264 aa16.54■□□□□ 0.24
CHD3-214ENST00000572579 KCNA7Q96RP8 456 aa16.54■□□□□ 0.24
CHD3-214ENST00000572579 ZNF382Q96SR6 550 aa16.54■□□□□ 0.24
CHD3-214ENST00000572579 GALNT9Q9HCQ5 603 aa16.54■□□□□ 0.24
CHD3-214ENST00000572579 KCNN3Q9UGI6 736 aa16.54■□□□□ 0.24
CHD3-214ENST00000572579 BCAP29Q9UHQ4 241 aa16.54■□□□□ 0.24
CHD3-214ENST00000572579 TIMM22Q9Y584 194 aa16.54■□□□□ 0.24
CHD3-214ENST00000572579 CAPN14A8MX76 684 aa16.53■□□□□ 0.24
CHD3-214ENST00000572579 AHRRA9YTQ3 701 aa16.53■□□□□ 0.24
CHD3-214ENST00000572579 SYT5O00445 386 aa16.53■□□□□ 0.24
CHD3-214ENST00000572579 GNB5O14775 395 aa16.53■□□□□ 0.24
CHD3-214ENST00000572579 ICOSLGO75144 302 aa16.53■□□□□ 0.24
CHD3-214ENST00000572579 UGT2B11O75310 529 aa16.53■□□□□ 0.24
CHD3-214ENST00000572579 NAGAP17050 411 aa16.53■□□□□ 0.24
CHD3-214ENST00000572579 ATP5F1P24539 256 aaPredicted RBP16.53■□□□□ 0.24
CHD3-214ENST00000572579 DEKP35659 375 aaKnown RBP16.53■□□□□ 0.24
CHD3-214ENST00000572579 ALDH9A1P49189 494 aa16.53■□□□□ 0.24
CHD3-214ENST00000572579 NAGLUP54802 743 aa16.53■□□□□ 0.24
CHD3-214ENST00000572579 FOXA1P55317 472 aa16.53■□□□□ 0.24
CHD3-214ENST00000572579 TRA2BP62995 288 aaKnown RBP16.53■□□□□ 0.24
CHD3-214ENST00000572579 SLC29A2Q14542 456 aa16.53■□□□□ 0.24
CHD3-214ENST00000572579 NHSL2Q5HYW2 709 aa16.53■□□□□ 0.24
CHD3-214ENST00000572579 WIPI1Q5MNZ9 446 aaPredicted RBP16.53■□□□□ 0.24
CHD3-214ENST00000572579 SCIMPQ6UWF3 145 aa16.53■□□□□ 0.24
CHD3-214ENST00000572579 WDR53Q7Z5U6 358 aaPredicted RBP16.53■□□□□ 0.24
CHD3-214ENST00000572579 KLHL29Q96CT2 875 aa16.53■□□□□ 0.24
CHD3-214ENST00000572579 LCORQ96JN0 433 aaPredicted RBP16.53■□□□□ 0.24
CHD3-214ENST00000572579 UGT2B28Q9BY64 529 aa16.53■□□□□ 0.24
CHD3-214ENST00000572579 PRDM14Q9GZV8 571 aa16.53■□□□□ 0.24
CHD3-214ENST00000572579 GSTO2Q9H4Y5 243 aa16.53■□□□□ 0.24
CHD3-214ENST00000572579 TNFRSF12AQ9NP84 129 aa16.53■□□□□ 0.24
CHD3-214ENST00000572579 B4GALT7Q9UBV7 327 aa16.53■□□□□ 0.24
CHD3-214ENST00000572579 UTS2RQ9UKP6 389 aa16.53■□□□□ 0.24
CHD3-214ENST00000572579 DLGAP4Q9Y2H0 992 aa16.53■□□□□ 0.24
CHD3-214ENST00000572579 GPR55Q9Y2T6 319 aaPredicted RBP16.53■□□□□ 0.24
CHD3-214ENST00000572579 MTORP42345 2549 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 A0A1W2PPM1 405 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 G3V2L1 256 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 TO15178 435 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 IL3P08700 152 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 PYGBP11216 843 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 DRD5P21918 477 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 ZNF136P52737 540 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 NRG3P56975 720 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 RASA2Q15283 850 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 SLC25A35Q3KQZ1 300 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 GPRIN3Q6ZVF9 776 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 TRMT10CQ7L0Y3 403 aaKnown RBP16.52■□□□□ 0.24
CHD3-214ENST00000572579 YRDCQ86U90 279 aaKnown RBP16.52■□□□□ 0.24
CHD3-214ENST00000572579 PACS2Q86VP3 889 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 LIX1Q8N485 282 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 FAM83FQ8NEG4 500 aaPredicted RBP16.52■□□□□ 0.24
CHD3-214ENST00000572579 METTL6Q8TCB7 284 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 C16orf78Q8WTQ4 265 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 KAT2AQ92830 837 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 MTBPQ96DY7 904 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 L3HYPDHQ96EM0 354 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 SH3GL2Q99962 352 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 ZNF559Q9BR84 538 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 MCM8Q9UJA3 840 aa16.52■□□□□ 0.24
CHD3-214ENST00000572579 ANKRD17O75179 2603 aaKnown RBP16.52■□□□□ 0.23
CHD3-214ENST00000572579 AKAP6Q13023 2319 aa16.52■□□□□ 0.23
CHD3-214ENST00000572579 FREM3P0C091 2139 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 GOLGA6L10A6NI86 522 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 C17orf51A8MQB3 221 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 SNPHO15079 494 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 GUCY1B2O75343 617 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 ULK1O75385 1050 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 CT45A8P0DMV1 189 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 CT45A9P0DMV2 189 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 HSD3B1P14060 373 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 HSD3B2P26439 372 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 PPICP45877 212 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 SLCO1A2P46721 670 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 CORO7P57737 925 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 CSTF3Q12996 717 aaKnown RBP16.51■□□□□ 0.23
CHD3-214ENST00000572579 CT45A2Q5DJT8 189 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 LGSNQ5TDP6 509 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 TMEM81Q6P7N7 255 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 ARSKQ6UWY0 536 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 PLXDC2Q6UX71 529 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 ANGPTL8Q6UXH0 198 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 NPSR1Q6W5P4 371 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 SPNS3Q6ZMD2 512 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 NUP54Q7Z3B4 507 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 GSPT2Q8IYD1 628 aaKnown RBP16.51■□□□□ 0.23
CHD3-214ENST00000572579 CLYBLQ8N0X4 340 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 OR9A2Q8NGT5 310 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 HSPBAP1Q96EW2 488 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 LIME1Q9H400 295 aa16.51■□□□□ 0.23
CHD3-214ENST00000572579 EXO1Q9UQ84 846 aaKnown RBP16.51■□□□□ 0.23
CHD3-214ENST00000572579 KIAA1549Q9HCM3 1950 aa16.5■□□□□ 0.23
CHD3-214ENST00000572579 FAM221AA4D161 298 aa16.5■□□□□ 0.23
CHD3-214ENST00000572579 HSPB2A8KAH6 182 aa16.5■□□□□ 0.23
CHD3-214ENST00000572579 PCDH7O60245 1069 aa16.5■□□□□ 0.23
CHD3-214ENST00000572579 CTAG2O75638 210 aa16.5■□□□□ 0.23
CHD3-214ENST00000572579 KRT6AP02538 564 aa16.5■□□□□ 0.23
CHD3-214ENST00000572579 KRT6BP04259 564 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms