RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ANXA4P09525 319 aaPredicted RBP13.4□□□□□ -0.26
COMMD4-225ENST00000569245 SLC35E2P0CK97 266 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 RNF224P0DH78 156 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 GP1BBP13224 206 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 ZNF24P17028 368 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 TACR1P25103 407 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 PRDX6P30041 224 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 SOX3P41225 446 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 GSTM5P46439 218 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 ASMTP46597 345 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 XKP51811 444 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 CASP6P55212 293 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 CLDN8P56748 225 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 C21orf58P58505 322 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 TRA2BP62995 288 aaKnown RBP13.4□□□□□ -0.26
COMMD4-225ENST00000569245 PTGR1Q14914 329 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 KRTCAP3Q53RY4 240 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 C6orf163Q5TEZ5 329 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 PAOXQ6QHF9 649 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 MDGA2Q7Z553 956 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 FJX1Q86VR8 437 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 SULF2Q8IWU5 870 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.4□□□□□ -0.26
COMMD4-225ENST00000569245 FBXL20Q96IG2 436 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 GAL3ST4Q96RP7 486 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 EBPLQ9BY08 206 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 MAPRE3Q9UPY8 281 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 ERVK-19Q9WJR5 959 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 SLC22A3O75751 556 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 WISP2O76076 250 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 UBOX5O94941 541 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 LDLRP01130 860 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 STSP08842 583 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 RFC3P40938 356 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 ALDH9A1P49189 494 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 MEOX1P50221 254 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 GPR85P60893 370 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 UFM1P61960 85 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 ZNF763Q0D2J5 394 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 ZSCAN26Q16670 478 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 OPN5Q6U736 354 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 RNF111Q6ZNA4 994 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 SLC29A4Q7RTT9 530 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 FUNDC1Q8IVP5 155 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 RIMKLAQ8IXN7 391 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 POGLUT1Q8NBL1 392 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 GLB1L3Q8NCI6 653 aaPredicted RBP13.39□□□□□ -0.27
COMMD4-225ENST00000569245 TSPEARQ8WU66 669 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 MAGED4Q96JG8 741 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 GPR137Q96N19 417 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 FAIM2Q9BWQ8 316 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 DPY30Q9C005 99 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 MYNNQ9NPC7 610 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 BAIAP2L1Q9UHR4 511 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 SH3BGRL2Q9UJC5 107 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 PSME2Q9UL46 239 aa13.39□□□□□ -0.27
COMMD4-225ENST00000569245 GNG14A0A1W2PPG7 69 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 C1orf226A1L170 272 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 FAM234BA2RU67 622 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 TFECO14948 347 aaPredicted RBP13.38□□□□□ -0.27
COMMD4-225ENST00000569245 ASNA1O43681 348 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 IGKV3-11P04433 115 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 PRPS1L1P21108 318 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 NT5EP21589 574 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 ZFP36L2P47974 494 aaKnown RBP13.38□□□□□ -0.27
COMMD4-225ENST00000569245 CLNS1AP54105 237 aaKnown RBP13.38□□□□□ -0.27
COMMD4-225ENST00000569245 NME5P56597 212 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 BNIP1Q12981 228 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 MAPRE2Q15555 327 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 MPEG1Q2M385 716 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 SPRED3Q2MJR0 410 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.38□□□□□ -0.27
COMMD4-225ENST00000569245 ZNF750Q32MQ0 723 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 AGKQ53H12 422 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 RTL4Q6ZR62 310 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 IKBIPQ70UQ0 350 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 GALNT12Q8IXK2 581 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 C9orf40Q8IXQ3 194 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 PSD4Q8NDX1 1056 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 OR9I1Q8NGQ6 314 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 RP9Q8TA86 221 aaKnown RBP13.38□□□□□ -0.27
COMMD4-225ENST00000569245 NUBPLQ8TB37 319 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 SLC22A8Q8TCC7 542 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 C16orf78Q8WTQ4 265 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 TM4SF18Q96CE8 201 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 CMTM5Q96DZ9 223 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 NSL1Q96IY1 281 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 TSSK3Q96PN8 268 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 ARL8BQ9NVJ2 186 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 CCDC167Q9P0B6 97 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 PLEKHB1Q9UF11 243 aaPredicted RBP13.38□□□□□ -0.27
COMMD4-225ENST00000569245 PCDHA9Q9Y5H5 950 aa13.38□□□□□ -0.27
COMMD4-225ENST00000569245 SVILO95425 2214 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 A0A1W2PS29 197 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 WIPF3A6NGB9 483 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 G3V3Y1 287 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 SLC19A2O60779 497 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 ERAL1O75616 437 aaKnown RBP13.37□□□□□ -0.27
COMMD4-225ENST00000569245 COX4I1P13073 169 aa13.37□□□□□ -0.27
COMMD4-225ENST00000569245 CPMP14384 443 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms