RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 ZNF630Q2M218 657 aaPredicted RBP18.63■□□□□ 0.57
CLK3-225ENST00000569063 FAM71E1Q6IPT2 247 aa18.63■□□□□ 0.57
CLK3-225ENST00000569063 NOXRED1Q6NXP6 359 aa18.63■□□□□ 0.57
CLK3-225ENST00000569063 NTNG2Q96CW9 530 aa18.63■□□□□ 0.57
CLK3-225ENST00000569063 FAM111AQ96PZ2 611 aa18.63■□□□□ 0.57
CLK3-225ENST00000569063 SMC6Q96SB8 1091 aa18.63■□□□□ 0.57
CLK3-225ENST00000569063 PARD6BQ9BYG5 372 aa18.63■□□□□ 0.57
CLK3-225ENST00000569063 MYNNQ9NPC7 610 aa18.63■□□□□ 0.57
CLK3-225ENST00000569063 CHST11Q9NPF2 352 aa18.63■□□□□ 0.57
CLK3-225ENST00000569063 SLC17A7Q9P2U7 560 aa18.63■□□□□ 0.57
CLK3-225ENST00000569063 MYO1GB0I1T2 1018 aa18.62■□□□□ 0.57
CLK3-225ENST00000569063 NPIPA2E9PIF3 369 aa18.62■□□□□ 0.57
CLK3-225ENST00000569063 NPIPA3F8WFD2 350 aa18.62■□□□□ 0.57
CLK3-225ENST00000569063 NPHS1O60500 1241 aa18.62■□□□□ 0.57
CLK3-225ENST00000569063 PPM1BO75688 479 aa18.62■□□□□ 0.57
CLK3-225ENST00000569063 LRATO95237 230 aa18.62■□□□□ 0.57
CLK3-225ENST00000569063 ABCB1P08183 1280 aaPredicted RBP18.62■□□□□ 0.57
CLK3-225ENST00000569063 HTR1EP28566 365 aa18.62■□□□□ 0.57
CLK3-225ENST00000569063 GRNP28799 593 aaKnown RBP18.62■□□□□ 0.57
CLK3-225ENST00000569063 CDSNQ15517 529 aa18.62■□□□□ 0.57
CLK3-225ENST00000569063 ERCC6LQ2NKX8 1250 aa18.62■□□□□ 0.57
CLK3-225ENST00000569063 GXYLT1Q4G148 440 aa18.62■□□□□ 0.57
CLK3-225ENST00000569063 TMEM198Q66K66 360 aa18.62■□□□□ 0.57
CLK3-225ENST00000569063 TMEM211Q6ICI0 200 aa18.62■□□□□ 0.57
CLK3-225ENST00000569063 IKBIPQ70UQ0 350 aa18.62■□□□□ 0.57
CLK3-225ENST00000569063 PRR22Q8IZ63 422 aa18.62■□□□□ 0.57
CLK3-225ENST00000569063 OR9A2Q8NGT5 310 aa18.62■□□□□ 0.57
CLK3-225ENST00000569063 TCP10LQ8TDR4 215 aa18.62■□□□□ 0.57
CLK3-225ENST00000569063 ZNF597Q96LX8 424 aa18.62■□□□□ 0.57
CLK3-225ENST00000569063 JSRP1Q96MG2 331 aaPredicted RBP18.62■□□□□ 0.57
CLK3-225ENST00000569063 ACKR4Q9NPB9 350 aa18.62■□□□□ 0.57
CLK3-225ENST00000569063 B4GALT7Q9UBV7 327 aa18.62■□□□□ 0.57
CLK3-225ENST00000569063 GPR55Q9Y2T6 319 aaPredicted RBP18.62■□□□□ 0.57
CLK3-225ENST00000569063 POLR3HQ9Y535 204 aaPredicted RBP18.62■□□□□ 0.57
CLK3-225ENST00000569063 TRGV5A0A0B4J1U4 118 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 FRG2CA6NGY1 282 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 TO15178 435 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 HNRNPRO43390 633 aaKnown RBP18.61■□□□□ 0.57
CLK3-225ENST00000569063 RGS14O43566 566 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 PLOD3O60568 738 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 SPAG7O75391 227 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 SEC22BO75396 215 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 CLDN14O95500 239 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 FGF4P08620 206 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 CASP3P42574 277 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 MAN2A2P49641 1150 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 NNATQ16517 81 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 PRSS53Q2L4Q9 553 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 KANK2Q63ZY3 851 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 BICRALQ6AI39 1079 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 TMEM81Q6P7N7 255 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 Q6ZSR9 355 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 NUP54Q7Z3B4 507 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 PACS2Q86VP3 889 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 TICAM1Q8IUC6 712 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 FAM9CQ8IZT9 166 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 MARVELD2Q8N4S9 558 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 KAT2AQ92830 837 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 RILPQ96NA2 401 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 BTBD9Q96Q07 612 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 BBS4Q96RK4 519 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 STMN4Q9H169 189 aaPredicted RBP18.61■□□□□ 0.57
CLK3-225ENST00000569063 TUBB1Q9H4B7 451 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 LDAHQ9H6V9 325 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 PNPLA3Q9NST1 481 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 C1orf109Q9NX04 203 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 EXO1Q9UQ84 846 aaKnown RBP18.61■□□□□ 0.57
CLK3-225ENST00000569063 PTGDR2Q9Y5Y4 395 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 CRYBG3Q68DQ2 2970 aa18.61■□□□□ 0.57
CLK3-225ENST00000569063 MAST4O15021 2626 aa18.6■□□□□ 0.57
CLK3-225ENST00000569063 UNC79Q9P2D8 2635 aa18.6■□□□□ 0.57
CLK3-225ENST00000569063 CHEK2O96017 543 aa18.6■□□□□ 0.57
CLK3-225ENST00000569063 ARL13AQ5H913 290 aaPredicted RBP18.6■□□□□ 0.57
CLK3-225ENST00000569063 CDC26Q8NHZ8 85 aa18.6■□□□□ 0.57
CLK3-225ENST00000569063 HGDQ93099 445 aa18.6■□□□□ 0.57
CLK3-225ENST00000569063 SARAFQ96BY9 339 aa18.6■□□□□ 0.57
CLK3-225ENST00000569063 OMA1Q96E52 524 aa18.6■□□□□ 0.57
CLK3-225ENST00000569063 TMEM41AQ96HV5 264 aa18.6■□□□□ 0.57
CLK3-225ENST00000569063 MECRQ9BV79 373 aa18.6■□□□□ 0.57
CLK3-225ENST00000569063 ANKRA2Q9H9E1 313 aa18.6■□□□□ 0.57
CLK3-225ENST00000569063 LRTM1Q9HBL6 345 aa18.6■□□□□ 0.57
CLK3-225ENST00000569063 EML4Q9HC35 981 aaKnown RBP18.6■□□□□ 0.57
CLK3-225ENST00000569063 MIEF1Q9NQG6 463 aa18.6■□□□□ 0.57
CLK3-225ENST00000569063 RAB21Q9UL25 225 aa18.6■□□□□ 0.57
CLK3-225ENST00000569063 DNAJC15Q9Y5T4 150 aa18.6■□□□□ 0.57
CLK3-225ENST00000569063 CELSR2Q9HCU4 2923 aa18.6■□□□□ 0.57
CLK3-225ENST00000569063 ESPNB1AK53 854 aa18.59■□□□□ 0.57
CLK3-225ENST00000569063 SLITRK5O94991 958 aa18.59■□□□□ 0.57
CLK3-225ENST00000569063 CHRNGP07510 517 aa18.59■□□□□ 0.57
CLK3-225ENST00000569063 CT45A8P0DMV1 189 aa18.59■□□□□ 0.57
CLK3-225ENST00000569063 CT45A9P0DMV2 189 aa18.59■□□□□ 0.57
CLK3-225ENST00000569063 NEFHP12036 1026 aa18.59■□□□□ 0.57
CLK3-225ENST00000569063 CREB1P16220 341 aa18.59■□□□□ 0.57
CLK3-225ENST00000569063 ENDOUP21128 410 aaKnown RBP18.59■□□□□ 0.57
CLK3-225ENST00000569063 PSPHP78330 225 aa18.59■□□□□ 0.57
CLK3-225ENST00000569063 PLCXD2Q0VAA5 305 aa18.59■□□□□ 0.57
CLK3-225ENST00000569063 UGT3A2Q3SY77 523 aa18.59■□□□□ 0.57
CLK3-225ENST00000569063 CT45A2Q5DJT8 189 aa18.59■□□□□ 0.57
CLK3-225ENST00000569063 FNDC7Q5VTL7 733 aa18.59■□□□□ 0.57
CLK3-225ENST00000569063 CLYBLQ8N0X4 340 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms