RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 UBQLNLQ8IYU4 475 aa15.8■□□□□ 0.12
CMTM3-213ENST00000566756 SLC44A3Q8N4M1 653 aa15.8■□□□□ 0.12
CMTM3-213ENST00000566756 VANGL1Q8TAA9 524 aaPredicted RBP15.8■□□□□ 0.12
CMTM3-213ENST00000566756 MOAP1Q96BY2 351 aa15.8■□□□□ 0.12
CMTM3-213ENST00000566756 MED18Q9BUE0 208 aa15.8■□□□□ 0.12
CMTM3-213ENST00000566756 FNDC11Q9BVV2 318 aa15.8■□□□□ 0.12
CMTM3-213ENST00000566756 FAIM2Q9BWQ8 316 aa15.8■□□□□ 0.12
CMTM3-213ENST00000566756 OR51I1Q9H343 314 aa15.8■□□□□ 0.12
CMTM3-213ENST00000566756 KCNK12Q9HB15 430 aa15.8■□□□□ 0.12
CMTM3-213ENST00000566756 FGF20Q9NP95 211 aaPredicted RBP15.8■□□□□ 0.12
CMTM3-213ENST00000566756 PIAS3Q9Y6X2 628 aa15.8■□□□□ 0.12
CMTM3-213ENST00000566756 NUMA1Q14980 2115 aa15.79■□□□□ 0.12
CMTM3-213ENST00000566756 A0A1W2PP55 124 aa15.79■□□□□ 0.12
CMTM3-213ENST00000566756 PRAMEF27A3QJZ7 478 aa15.79■□□□□ 0.12
CMTM3-213ENST00000566756 IGLON5A6NGN9 336 aa15.79■□□□□ 0.12
CMTM3-213ENST00000566756 SNTNA6NMZ2 147 aa15.79■□□□□ 0.12
CMTM3-213ENST00000566756 OR12D1P0DN82 309 aa15.79■□□□□ 0.12
CMTM3-213ENST00000566756 NR2F1P10589 423 aa15.79■□□□□ 0.12
CMTM3-213ENST00000566756 GLULP15104 373 aa15.79■□□□□ 0.12
CMTM3-213ENST00000566756 GIPRP48546 466 aa15.79■□□□□ 0.12
CMTM3-213ENST00000566756 SYT14P1Q58G82 188 aa15.79■□□□□ 0.12
CMTM3-213ENST00000566756 KIAA1161Q6NSJ0 714 aa15.79■□□□□ 0.12
CMTM3-213ENST00000566756 GJD3Q8N144 294 aa15.79■□□□□ 0.12
CMTM3-213ENST00000566756 OR52I1Q8NGK6 324 aa15.79■□□□□ 0.12
CMTM3-213ENST00000566756 SUN3Q8TAQ9 357 aa15.79■□□□□ 0.12
CMTM3-213ENST00000566756 SLC25A46Q96AG3 418 aa15.79■□□□□ 0.12
CMTM3-213ENST00000566756 AMDHD1Q96NU7 426 aa15.79■□□□□ 0.12
CMTM3-213ENST00000566756 MKRN2Q9H000 416 aaKnown RBP15.79■□□□□ 0.12
CMTM3-213ENST00000566756 TEX10Q9NXF1 929 aaPredicted RBP15.79■□□□□ 0.12
CMTM3-213ENST00000566756 POU2F3Q9UKI9 436 aa15.79■□□□□ 0.12
CMTM3-213ENST00000566756 CMAHPQ9Y471 501 aa15.79■□□□□ 0.12
CMTM3-213ENST00000566756 SZT2Q5T011 3432 aa15.79■□□□□ 0.12
CMTM3-213ENST00000566756 PLXND1Q9Y4D7 1925 aa15.79■□□□□ 0.12
CMTM3-213ENST00000566756 TMEM129A0AVI4 362 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 RGS13O14921 159 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 PCDH8O95206 1070 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 IGFBP1P08833 259 aaPredicted RBP15.78■□□□□ 0.12
CMTM3-213ENST00000566756 TRAPPC2P0DI81 140 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 TRAPPC2BP0DI82 140 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 MMP11P24347 488 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 SMSP52788 366 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 RAB40BQ12829 278 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 SMAD4Q13485 552 aaKnown RBP15.78■□□□□ 0.12
CMTM3-213ENST00000566756 GPR50Q13585 617 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 LARS2Q15031 903 aaKnown RBP15.78■□□□□ 0.12
CMTM3-213ENST00000566756 SYPL1Q16563 259 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 FAM180BQ6P0A1 224 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 HSDL2Q6YN16 418 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 ZER1Q7Z7L7 766 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 C2orf73Q8N5S3 287 aaPredicted RBP15.78■□□□□ 0.12
CMTM3-213ENST00000566756 MORN4Q8NDC4 146 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 OR4K5Q8NGD3 323 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 KIAA1143Q96AT1 154 aaPredicted RBP15.78■□□□□ 0.12
CMTM3-213ENST00000566756 ERLEC1Q96DZ1 483 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 CAMK1GQ96NX5 476 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 GLIPR2Q9H4G4 154 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 MVB12BQ9H7P6 319 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 TMEM165Q9HC07 324 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 SLC35C2Q9NQQ7 365 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 MAN2C1Q9NTJ4 1040 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 ERVK13-1Q9NX77 482 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 TVP23BQ9NYZ1 205 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 SLC23A2Q9UGH3 650 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 SERGEFQ9UGK8 458 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 ACSL5Q9ULC5 683 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 TMEM98Q9Y2Y6 226 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 PCYT1BQ9Y5K3 369 aaPredicted RBP15.78■□□□□ 0.12
CMTM3-213ENST00000566756 A0A0G2JPF8 293 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 A0A1W2PQF6 199 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 HNRNPCL2B2RXH8 293 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 HNRNPCL3B7ZW38 293 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 H7BY64 318 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 SEC14L5O43304 696 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 MBTPS2O43462 519 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 PLRG1O43660 514 aaKnown RBP15.78■□□□□ 0.12
CMTM3-213ENST00000566756 PRKYO43930 277 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 HNRNPCL4P0DMR1 293 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 HOXB2P14652 356 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 NTSP30990 170 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 HTR3AP46098 478 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 OR2B6P58173 313 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 CSNK1G2P78368 415 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 PIN1Q13526 163 aaPredicted RBP15.78■□□□□ 0.12
CMTM3-213ENST00000566756 GINS1Q14691 196 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 WSCD2Q2TBF2 565 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 OR8H2Q8N162 312 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 PLA2G15Q8NCC3 412 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 CREB3L4Q8TEY5 395 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 MSANTD3Q96H12 275 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 ZNF486Q96H40 463 aaPredicted RBP15.78■□□□□ 0.12
CMTM3-213ENST00000566756 ZNF582Q96NG8 517 aaPredicted RBP15.78■□□□□ 0.12
CMTM3-213ENST00000566756 PRAP1Q96NZ9 151 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 PINK1Q9BXM7 581 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 SRRQ9GZT4 340 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 SYNDIG1Q9H7V2 258 aa15.78■□□□□ 0.12
CMTM3-213ENST00000566756 SYT5O00445 386 aa15.77■□□□□ 0.12
CMTM3-213ENST00000566756 RGS5O15539 181 aa15.77■□□□□ 0.12
CMTM3-213ENST00000566756 OR1F1O43749 312 aa15.77■□□□□ 0.12
CMTM3-213ENST00000566756 TLX2O43763 284 aaPredicted RBP15.77■□□□□ 0.12
CMTM3-213ENST00000566756 GUCY1B2O75343 617 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms