RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 HSD3B1P14060 373 aa13.68□□□□□ -0.22
RNF40-209ENST00000566703 DNASE1P24855 282 aa13.68□□□□□ -0.22
RNF40-209ENST00000566703 HSD3B2P26439 372 aa13.68□□□□□ -0.22
RNF40-209ENST00000566703 NAGLUP54802 743 aa13.68□□□□□ -0.22
RNF40-209ENST00000566703 GALNT1Q10472 559 aaPredicted RBP13.68□□□□□ -0.22
RNF40-209ENST00000566703 RCAN2Q14206 197 aa13.68□□□□□ -0.22
RNF40-209ENST00000566703 EIPR1Q53HC9 387 aa13.68□□□□□ -0.22
RNF40-209ENST00000566703 SGO1Q5FBB7 561 aa13.68□□□□□ -0.22
RNF40-209ENST00000566703 WIPI1Q5MNZ9 446 aaPredicted RBP13.68□□□□□ -0.22
RNF40-209ENST00000566703 ANGPTL8Q6UXH0 198 aa13.68□□□□□ -0.22
RNF40-209ENST00000566703 CAMKMTQ7Z624 323 aa13.68□□□□□ -0.22
RNF40-209ENST00000566703 TGIF2LYQ8IUE0 185 aa13.68□□□□□ -0.22
RNF40-209ENST00000566703 PRR22Q8IZ63 422 aa13.68□□□□□ -0.22
RNF40-209ENST00000566703 ZNF483Q8TF39 744 aaPredicted RBP13.68□□□□□ -0.22
RNF40-209ENST00000566703 OMA1Q96E52 524 aa13.68□□□□□ -0.22
RNF40-209ENST00000566703 DTNBP1Q96EV8 351 aa13.68□□□□□ -0.22
RNF40-209ENST00000566703 ZNF681Q96N22 645 aa13.68□□□□□ -0.22
RNF40-209ENST00000566703 ZFP3Q96NJ6 502 aa13.68□□□□□ -0.22
RNF40-209ENST00000566703 CDC42EP4Q9H3Q1 356 aaKnown RBP13.68□□□□□ -0.22
RNF40-209ENST00000566703 JKAMPQ9P055 326 aa13.68□□□□□ -0.22
RNF40-209ENST00000566703 TRPS1Q9UHF7 1281 aa13.68□□□□□ -0.22
RNF40-209ENST00000566703 ZNF780BQ9Y6R6 833 aa13.68□□□□□ -0.22
RNF40-209ENST00000566703 HIVEP1P15822 2718 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 TUBAL3A6NHL2 446 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 SNPHO15079 494 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 ABCB7O75027 752 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 ERAL1O75616 437 aaKnown RBP13.67□□□□□ -0.22
RNF40-209ENST00000566703 CBX7O95931 251 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 PDYNP01213 254 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 CYP4B1P13584 511 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 DRD2P14416 443 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 SOX18P35713 384 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 FEN1P39748 380 aaKnown RBP13.67□□□□□ -0.22
RNF40-209ENST00000566703 PTGDSP41222 190 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 CDH13P55290 713 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 EEF1A1P68104 462 aaKnown RBP13.67□□□□□ -0.22
RNF40-209ENST00000566703 PSPHP78330 225 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 SORDQ00796 357 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 SNTB1Q13884 538 aaKnown RBP13.67□□□□□ -0.22
RNF40-209ENST00000566703 LGSNQ5TDP6 509 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 EEF1A1P5Q5VTE0 462 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 LETMD1Q6P1Q0 360 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 SCIMPQ6UWF3 145 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 ENPP6Q6UWR7 440 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 CDC20BQ86Y33 519 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 SAMD14Q8IZD0 417 aaPredicted RBP13.67□□□□□ -0.22
RNF40-209ENST00000566703 TMEM151AQ8N4L1 468 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 FAM83FQ8NEG4 500 aaPredicted RBP13.67□□□□□ -0.22
RNF40-209ENST00000566703 ZNF675Q8TD23 568 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 ERP27Q96DN0 273 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 MBD6Q96DN6 1003 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 RMND5BQ96G75 393 aaPredicted RBP13.67□□□□□ -0.22
RNF40-209ENST00000566703 UCN2Q96RP3 112 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 TRIB1Q96RU8 372 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 NODALQ96S42 347 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 PAFAH2Q99487 392 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 OSBPL11Q9BXB4 747 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 FARSBQ9NSD9 589 aaKnown RBP13.67□□□□□ -0.22
RNF40-209ENST00000566703 VPS29Q9UBQ0 182 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 CBLCQ9ULV8 474 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 DTX4Q9Y2E6 619 aa13.67□□□□□ -0.22
RNF40-209ENST00000566703 ARHGAP21Q5T5U3 1957 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 FRG2CA6NGY1 282 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 OR6C70A6NIJ9 312 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 KDM4EB2RXH2 506 aaPredicted RBP13.66□□□□□ -0.22
RNF40-209ENST00000566703 PPP6CO00743 305 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 UGT2B11O75310 529 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 KRT6AP02538 564 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 KRT6BP04259 564 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 SNRPAP09012 282 aaKnown RBP13.66□□□□□ -0.22
RNF40-209ENST00000566703 HSD17B3P37058 310 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 KRT6CP48668 564 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 EMDP50402 254 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 WNT3P56703 355 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 CLCQ05315 142 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 PLCXD2Q0VAA5 305 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 WHAMMP3Q1A5X7 153 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 TRMT12Q53H54 448 aaKnown RBP13.66□□□□□ -0.22
RNF40-209ENST00000566703 UBAP2Q5T6F2 1119 aaKnown RBP13.66□□□□□ -0.22
RNF40-209ENST00000566703 YRDCQ86U90 279 aaKnown RBP13.66□□□□□ -0.22
RNF40-209ENST00000566703 MMGT1Q8N4V1 131 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 OR52R1Q8NGF1 315 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 KLHL29Q96CT2 875 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 TMCO6Q96DC7 493 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 CNRIP1Q96F85 164 aaPredicted RBP13.66□□□□□ -0.22
RNF40-209ENST00000566703 FMO2Q99518 471 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 TM9SF2Q99805 663 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 ITPAQ9BY32 194 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 OR2B2Q9GZK3 357 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 MCM8Q9UJA3 840 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 GPR55Q9Y2T6 319 aaPredicted RBP13.66□□□□□ -0.22
RNF40-209ENST00000566703 PLLPQ9Y342 182 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 MRPS18CQ9Y3D5 142 aaKnown RBP13.66□□□□□ -0.22
RNF40-209ENST00000566703 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.66□□□□□ -0.22
RNF40-209ENST00000566703 NCKAP5O14513 1909 aa13.66□□□□□ -0.22
RNF40-209ENST00000566703 SPG11Q96JI7 2443 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 C2CD3Q4AC94 2353 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 A0A1B0GTL3 188 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 A8MT66 165 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 TRIM49D1C9J1S8 452 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms