RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ZNF331Q9NQX6 463 aaPredicted RBP1.24□□□□□ -2.21
SMG1-212ENST00000566328 ANAPC2Q9UJX6 822 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 VPS28Q9UK41 221 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 CA5BQ9Y2D0 317 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 EXOC6BQ9Y2D4 811 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 SH3GLB1Q9Y371 365 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 DDX49Q9Y6V7 483 aaKnown RBP1.24□□□□□ -2.21
SMG1-212ENST00000566328 MYO5AQ9Y4I1 1855 aaKnown RBP1.24□□□□□ -2.21
SMG1-212ENST00000566328 SPEF2Q9C093 1822 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 DDX60Q8IY21 1712 aaKnown RBP1.23□□□□□ -2.21
SMG1-212ENST00000566328 NRXN2Q9P2S2 1712 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 MYH13Q9UKX3 1938 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 ITIH6Q6UXX5 1313 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 CDHR2Q9BYE9 1310 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 IGKV1D-17A0A075B6S4 117 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 IGHV3OR16-12A0A075B7B8 117 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 A0A1B0GUL7 405 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 C2orf92A0A1B0GVN3 265 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 hCG_1807616A0A1W2PRN6 198 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 SLC15A5A6NIM6 579 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 ZNF732B4DXR9 585 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 P2RX6O15547 441 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 WDHD1O75717 1129 aaPredicted RBP1.23□□□□□ -2.21
SMG1-212ENST00000566328 IGHG3P01860 377 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 IGHDP01880 384 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 HOXB7P09629 217 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 OR52Z1P0C646 297 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 UBTFL1P0CB47 393 aaPredicted RBP1.23□□□□□ -2.21
SMG1-212ENST00000566328 FOSL2P15408 326 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 ERCC2P18074 760 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 ACAT1P24752 427 aaKnown RBP1.23□□□□□ -2.21
SMG1-212ENST00000566328 RPS12P25398 132 aaKnown RBP1.23□□□□□ -2.21
SMG1-212ENST00000566328 CALML3P27482 149 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 PMELP40967 661 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 RGS7P49802 495 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 SNAP25P60880 206 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 SPP2Q13103 211 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 ORC2Q13416 577 aaPredicted RBP1.23□□□□□ -2.21
SMG1-212ENST00000566328 SNTB1Q13884 538 aaKnown RBP1.23□□□□□ -2.21
SMG1-212ENST00000566328 VGLL4Q14135 290 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 PRR4Q16378 134 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 KYAT1Q16773 422 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 RABL6Q3YEC7 729 aaPredicted RBP1.23□□□□□ -2.21
SMG1-212ENST00000566328 ODF2Q5BJF6 829 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 PAGE2BQ5JRK9 111 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 GORABQ5T7V8 394 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 WDR78Q5VTH9 848 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 SLC22A10Q63ZE4 541 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 C17orf107Q6ZR85 190 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 C4orf50Q6ZRC1 276 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 NRARPQ7Z6K4 114 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 NLRP14Q86W24 1093 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 ERI1Q8IV48 349 aaKnown RBP1.23□□□□□ -2.21
SMG1-212ENST00000566328 ITPRIPQ8IWB1 547 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 ZNF491Q8N8L2 437 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 OR13C5Q8NGS8 318 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 ZNF671Q8TAW3 534 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 ACER1Q8TDN7 264 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 DYNLL2Q96FJ2 89 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 AK8Q96MA6 479 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 TTYH2Q9BSA4 534 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 ANKRD2Q9GZV1 360 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 UBQLN3Q9H347 655 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 BOLA2Q9H3K6 86 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 NANOGQ9H9S0 305 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 S100A14Q9HCY8 104 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 PDE7BQ9NP56 450 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 MED17Q9NVC6 651 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 AATFQ9NY61 560 aaKnown RBP eCLIP1.23□□□□□ -2.21
SMG1-212ENST00000566328 RAI14Q9P0K7 980 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 HMG20BQ9P0W2 317 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 ADD3Q9UEY8 706 aaKnown RBP1.23□□□□□ -2.21
SMG1-212ENST00000566328 APOBEC3BQ9UH17 382 aaKnown RBP1.23□□□□□ -2.21
SMG1-212ENST00000566328 SCN4AP35499 1836 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 WDR87Q6ZQQ6 2873 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 PDE4DIPQ5VU43 2346 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 KDM3BQ7LBC6 1761 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 WDR90Q96KV7 1748 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 FRYLO94915 3013 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 MYO15AQ9UKN7 3530 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 CEP290O15078 2479 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 ZNF831Q5JPB2 1677 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 AKAP11Q9UKA4 1901 aa1.23□□□□□ -2.21
SMG1-212ENST00000566328 TRPM7Q96QT4 1865 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 PLEKHG2Q9H7P9 1386 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 ZSWIM8A7E2V4 1837 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 SPEGQ15772 3267 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 DUOX1Q9NRD9 1551 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 MROH5Q6ZUA9 1318 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 ANKRD36CQ5JPF3 1778 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 ADAMTSL1Q8N6G6 1762 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 ARFGEF2Q9Y6D5 1785 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 CCL15-CCL14A0A0B4J2E2 113 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 LRCOL1A6NCL2 159 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 SNAI2O43623 268 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 NMT2O60551 498 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 ZNF324O75467 553 aaPredicted RBP1.22□□□□□ -2.21
SMG1-212ENST00000566328 IDH1O75874 414 aaKnown RBP1.22□□□□□ -2.21
SMG1-212ENST00000566328 STBD1O95210 358 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 IGKV1-17P01599 117 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms