RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 DPH1Q9BZG8 443 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 ALG2Q9H553 416 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 PIF1Q9H611 641 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 EPS8L2Q9H6S3 715 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 KAT8Q9H7Z6 458 aaKnown RBP10.35□□□□□ -0.75
SF3B3-205ENST00000564899 WDR54Q9H977 334 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 CXorf21Q9HAI6 301 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 C3orf14Q9HBI5 128 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 PNO1Q9NRX1 252 aaKnown RBP10.35□□□□□ -0.75
SF3B3-205ENST00000564899 THSD1Q9NS62 852 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 MAT2BQ9NZL9 334 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 PTGFRNQ9P2B2 879 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 GMPR2Q9P2T1 348 aaKnown RBP10.35□□□□□ -0.75
SF3B3-205ENST00000564899 CD300AQ9UGN4 299 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 SLC7A8Q9UHI5 535 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 GMEB1Q9Y692 573 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 A0A087WV62 115 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 TCRBV16S1A1N1A0A5B0 115 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 FAM220BPB1ANY3 271 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 IDSB3KWA1 339 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 UPK1AO00322 258 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 PLOD3O60568 738 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 SORBS2O94875 1100 aaKnown RBP10.34□□□□□ -0.75
SF3B3-205ENST00000564899 CYC1P08574 325 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 IFI6P09912 130 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 CT62P0C5K7 136 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 FAM87AP0C7U9 286 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 GPX2P18283 190 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 TNNI3P19429 210 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 RBMS1P29558 406 aaKnown RBP10.34□□□□□ -0.75
SF3B3-205ENST00000564899 SLC5A2P31639 672 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 GALNSP34059 522 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 CRATP43155 626 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 PRKAG1P54619 331 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 EMP2P54851 167 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 CORO7P57737 925 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 RPS26P62854 115 aaKnown RBP10.34□□□□□ -0.75
SF3B3-205ENST00000564899 MGAT2Q10469 447 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 FADDQ13158 208 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 MAP7Q14244 749 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 RGNQ15493 299 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 CYP51A1Q16850 503 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 COX20Q5RI15 118 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 C1orf146Q5VVC0 180 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 ZNF517Q6ZMY9 492 aaPredicted RBP10.34□□□□□ -0.75
SF3B3-205ENST00000564899 CCDC81Q6ZN84 652 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 TIPARPQ7Z3E1 657 aaKnown RBP10.34□□□□□ -0.75
SF3B3-205ENST00000564899 C10orf111Q8N326 155 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 OR2L13Q8N349 312 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 VWA5B2Q8N398 1253 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 ESX1Q8N693 406 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 FAM156AQ8NDB6 213 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 NUP43Q8NFH3 380 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 OR2T12Q8NG77 320 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 METTL21AQ8WXB1 218 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 MS4A4EQ96PG1 132 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 CRB3Q9BUF7 120 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 CNPPD1Q9BV87 410 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 SPRY4Q9C004 299 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 B3GNT4Q9C0J1 378 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 ADAP2Q9NPF8 381 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 GPATCH2Q9NW75 528 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 SUCOQ9UBS9 1254 aaKnown RBP10.34□□□□□ -0.75
SF3B3-205ENST00000564899 C3orf18Q9UK00 162 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 PADI1Q9ULC6 663 aa10.34□□□□□ -0.75
SF3B3-205ENST00000564899 RRP15Q9Y3B9 282 aaKnown RBP10.34□□□□□ -0.75
SF3B3-205ENST00000564899 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 A8MUA0 341 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 C17orf105B2RV13 164 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 DYRK3O43781 588 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 RAD1O60671 282 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 COQ9O75208 318 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 ALOX12BO75342 701 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 CD63P08962 238 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 ETFAP13804 333 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 WT1P19544 449 aaPredicted RBP10.33□□□□□ -0.76
SF3B3-205ENST00000564899 MSX2P35548 267 aaPredicted RBP10.33□□□□□ -0.76
SF3B3-205ENST00000564899 SOX18P35713 384 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 SOX11P35716 441 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 KHKP50053 298 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 ANXA11P50995 505 aaKnown RBP10.33□□□□□ -0.76
SF3B3-205ENST00000564899 GZMMP51124 257 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 PGDP52209 483 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 MVDP53602 400 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 CASP9P55211 416 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 MAP4K2Q12851 820 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 BNIP2Q12982 314 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 ZNF267Q14586 743 aaPredicted RBP10.33□□□□□ -0.76
SF3B3-205ENST00000564899 LASP1Q14847 261 aaKnown RBP10.33□□□□□ -0.76
SF3B3-205ENST00000564899 ELAVL1Q15717 326 aaKnown RBP10.33□□□□□ -0.76
SF3B3-205ENST00000564899 TRMT12Q53H54 448 aaKnown RBP10.33□□□□□ -0.76
SF3B3-205ENST00000564899 GCNT6Q5T4J0 391 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 FHL5Q5TD97 284 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 FAAH2Q6GMR7 532 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 LANCL3Q6ZV70 420 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 NET1Q7Z628 596 aaPredicted RBP10.33□□□□□ -0.76
SF3B3-205ENST00000564899 SERPINA11Q86U17 422 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 CALHM3Q86XJ0 350 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 TMEM151BQ8IW70 566 aa10.33□□□□□ -0.76
SF3B3-205ENST00000564899 NLGN4XQ8N0W4 816 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms