RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 FAM120BQ96EK7 910 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 DUS3LQ96G46 650 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 TCEAL2Q9H3H9 227 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 MFSD1Q9H3U5 465 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 TOR3AQ9H497 397 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 GSTO2Q9H4Y5 243 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SACM1LQ9NTJ5 587 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 TAS2R16Q9NYV7 291 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 GPR34Q9UPC5 381 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 GOLGA4Q13439 2230 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 A0A1W2PP55 124 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SDHDO14521 159 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 GAPDHSO14556 408 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 MSL3P1P0C860 447 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CD1DP15813 335 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PTBP1P26599 531 aaKnown RBP eCLIP3.19□□□□□ -1.91e-7■■■■■ 45.3
CHD9-213ENST00000564845 CLCA4Q14CN2 919 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 NR6A1Q15406 480 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PLEKHS1Q5SXH7 462 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 VTCN1Q7Z7D3 282 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 ZFAND1Q8TCF1 268 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 NXPE2Q96DL1 559 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SPIN2AQ99865 258 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SPIN2BQ9BPZ2 258 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 THUMPD3Q9BV44 507 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 KIFC1Q9BW19 673 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 TMEM248Q9NWD8 314 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 COMMD3Q9UBI1 195 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CGGBP1Q9UFW8 167 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 SSR3Q9UNL2 185 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 LINC01553A4QN01 128 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 IGLON5A6NGN9 336 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CLDN24A6NM45 220 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 FRS3O43559 492 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 RLN1P04808 185 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SPINK2P20155 84 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 GDI1P31150 447 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CRISP3P54108 245 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PON2Q15165 354 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 KIF18BQ86Y91 864 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CD200R1Q8TD46 325 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 NACC2Q96BF6 587 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 POM121Q96HA1 1249 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 NECAB3Q96P71 396 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 OR11A1Q9GZK7 315 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PDE7BQ9NP56 450 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 TREX1Q9NSU2 369 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 TDP1Q9NUW8 608 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 ZDHHC7Q9NXF8 308 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 LHX3Q9UBR4 397 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 ZNF490Q9ULM2 529 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 NTNG1Q9Y2I2 539 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CHD3Q12873 2000 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 AHCYL1O43865 530 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 DOK2O60496 412 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CYP11A1P05108 521 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 UBL4AP11441 157 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 APEHP13798 732 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 MECP2P51608 486 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 RGS8P57771 180 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 FAPQ12884 760 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 RAET1GQ6H3X3 334 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 LPCAT3Q6P1A2 487 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SLC46A3Q7Z3Q1 461 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 THAP5Q7Z6K1 395 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 OR56A1Q8NGH5 318 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 OR10G6Q8NH81 332 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 ISL2Q96A47 359 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 COQ10BQ9H8M1 238 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SYNPO2LQ9H987 977 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 A0A0A6YYH2 397 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 A6NJ64 397 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 HDAC3O15379 428 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SNNO75324 88 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 SLC16A8O95907 504 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 IGFBP1P08833 259 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 C1SP09871 688 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 ZNF37AP17032 561 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 TBPP20226 339 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 ATP6V1B2P21281 511 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PTAFRP25105 342 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 RPL14P50914 215 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 PCBD1P61457 104 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SMN1Q16637 294 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 ATAT1Q5SQI0 421 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PXDC1Q5TGL8 231 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 XKR5Q6UX68 686 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 OR5D16Q8NGK9 328 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 APOLD1Q96LR9 279 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PREBQ9HCU5 417 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 IMP3Q9NV31 184 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 IGSF9Q9P2J2 1179 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CA14Q9ULX7 337 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PHF24Q9UPV7 400 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 POM121BA6NF01 834 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 SLC30A4O14863 429 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 CASKO14936 926 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 SURF4O15260 269 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 ST8SIA5O15466 376 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 GPC1P35052 558 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms