RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 HYAL3O43820 417 aaPredicted RBP19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 PRKRAO75569 313 aaKnown RBP19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 NPPBP16860 134 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 DCDC1P59894 354 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 PLEKHS1Q5SXH7 462 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 CHMP1BQ7LBR1 199 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 RASGEF1AQ8N9B8 481 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 OR6T1Q8NGN1 323 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 PIGKQ92643 395 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 KAT2AQ92830 837 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ARSGQ96EG1 525 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ZFP3Q96NJ6 502 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 F2RL3Q96RI0 385 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SLC45A1Q9Y2W3 748 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SPTBP11277 2137 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 B8ZZF3 427 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 PPM1DO15297 605 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 CHP2O43745 196 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 GALTP07902 379 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 FAM157BP0CG42 384 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 DDCP20711 480 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 DRD5P21918 477 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 OR10A3P58181 314 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 QSOX2Q6ZRP7 698 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 DNAJB7Q7Z6W7 309 aaPredicted RBP19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 NR2C2APQ86WQ0 139 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SAMD12Q8N8I0 201 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 BBS10Q8TAM1 723 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ADAMTS19Q8TE59 1207 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 HYLS1Q96M11 299 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 PAK6Q9NQU5 681 aaPredicted RBP19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 KLHL1Q9NR64 748 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 NTNG1Q9Y2I2 539 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 NPIPB8E9PQR5 432 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 RFPL3O75679 317 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 URODP06132 367 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 CD3GP09693 182 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 MPC1LP0DKB6 136 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 NR2F1P10589 423 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 PER3P56645 1201 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 VSX2P58304 361 aaPredicted RBP19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 CDKL4Q5MAI5 379 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 TEX261Q6UWH6 196 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SYT9Q86SS6 491 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 CACUL1Q86Y37 369 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 KIF18BQ86Y91 864 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 TMEM163Q8TC26 289 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 RNF32Q9H0A6 362 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ISG20L2Q9H9L3 353 aaKnown RBP19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 BRF2Q9HAW0 419 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 RRAGCQ9HB90 399 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 DMRT3Q9NQL9 472 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ENAMQ9NRM1 1142 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 CSNK1G3Q9Y6M4 447 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 U3KQ87 197 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 HCN1O60741 890 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 CCR6P51684 374 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SNRPD1P62314 119 aaKnown RBP19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 FAM71E1Q6IPT2 247 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ESPNLQ6ZVH7 1005 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 TRMT11Q7Z4G4 463 aaKnown RBP19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 DUSP18Q8NEJ0 188 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ANKK1Q8NFD2 765 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SPRYD4Q8WW59 207 aaPredicted RBP19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 TREX2Q9BQ50 279 aaPredicted RBP19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 TDP1Q9NUW8 608 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 CFAP97Q9P2B7 532 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 TESQ9UGI8 421 aaKnown RBP19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 KCND3Q9UK17 655 aa19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ARID1BQ8NFD5 2236 aaPredicted RBP19.34■□□□□ 0.69
MAP1LC3B-206ENST00000564844 A0A0B4J203 849 aa19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 GLTPD2A6NH11 291 aa19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 FAAHO00519 579 aa19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SOD1P00441 154 aa19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 IRS1P35568 1242 aa19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 PCDH1Q08174 1060 aa19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 TMEM91Q6ZNR0 172 aa19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 FAM46AQ96IP4 442 aaKnown RBP19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 CHIAQ9BZP6 476 aa19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 EIF3KQ9UBQ5 218 aaKnown RBP19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ING4Q9UNL4 249 aa19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 PRAMEF27A3QJZ7 478 aa19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 LGI1O95970 557 aa19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 CYBAP13498 195 aa19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 PLEKHM3Q6ZWE6 761 aa19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 COMMD7Q86VX2 200 aa19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 LSMEM1Q8N8F7 131 aa19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 OR8D4Q8NGM9 314 aa19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 C12orf66Q96MD2 445 aa19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 MACROD1Q9BQ69 325 aa19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 THAP7Q9BT49 309 aaPredicted RBP19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 IMP3Q9NV31 184 aaKnown RBP19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SCML1Q9UN30 329 aa19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 A4GNTQ9UNA3 340 aa19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 PPIEQ9UNP9 301 aaKnown RBP19.33■□□□□ 0.69
MAP1LC3B-206ENST00000564844 MYO15AQ9UKN7 3530 aa19.33■□□□□ 0.68
MAP1LC3B-206ENST00000564844 FEZF1A0PJY2 475 aa19.33■□□□□ 0.68
MAP1LC3B-206ENST00000564844 PCP4L1A6NKN8 68 aa19.33■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SOCS5O75159 536 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms