RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 CLEC18AA5D8T8 446 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 G3V3Y1 287 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 TO15178 435 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 HDAC3O15379 428 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 PDPK1O15530 556 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 PEX1O43933 1283 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 IFI6P09912 130 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 ALDOCP09972 364 aaKnown RBP7.87□□□□□ -1.15
UBR1-204ENST00000563239 CT45A8P0DMV1 189 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 CT45A9P0DMV2 189 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 CCL3P10147 92 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 KITP10721 976 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 EFNA1P20827 205 aaPredicted RBP7.87□□□□□ -1.15
UBR1-204ENST00000563239 DRD5P21918 477 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 MC3RP41968 323 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 PPICP45877 212 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 CDK9P50750 372 aaKnown RBP7.87□□□□□ -1.15
UBR1-204ENST00000563239 CLDN8P56748 225 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 CORO7P57737 925 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 GPR85P60893 370 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 FOXO1Q12778 655 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 NTRK2Q16620 822 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 SLC9B1Q4ZJI4 515 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 CT45A2Q5DJT8 189 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 C6orf163Q5TEZ5 329 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 DESI1Q6ICB0 168 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 OGFOD2Q6N063 350 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 FAM180AQ6UWF9 173 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 TMEM107Q6UX40 140 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 CLEC18BQ6UXF7 455 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 NPSR1Q6W5P4 371 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 RTL4Q6ZR62 310 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 LRRC34Q8IZ02 419 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 PRR22Q8IZ63 422 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 KIRREL3Q8IZU9 778 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 OR2L13Q8N349 312 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 CPSF7Q8N684 471 aaKnown RBP7.87□□□□□ -1.15
UBR1-204ENST00000563239 BCORP1Q8N888 145 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 ZFP62Q8NB50 900 aaPredicted RBP7.87□□□□□ -1.15
UBR1-204ENST00000563239 GOLM1Q8NBJ4 401 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 CLEC18CQ8NCF0 446 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 PSD4Q8NDX1 1056 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 OR10G3Q8NGC4 313 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 DNAJB8Q8NHS0 232 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 SLC22A8Q8TCC7 542 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 PAQR8Q8TEZ7 354 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 NR4A3Q92570 626 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 SPACA9Q96E40 222 aaPredicted RBP7.87□□□□□ -1.15
UBR1-204ENST00000563239 LCORQ96JN0 433 aaPredicted RBP7.87□□□□□ -1.15
UBR1-204ENST00000563239 MAELQ96JY0 434 aaKnown RBP7.87□□□□□ -1.15
UBR1-204ENST00000563239 SGCZQ96LD1 299 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 VSTM2LQ96N03 204 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 BTBD9Q96Q07 612 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 FOLH1BQ9HBA9 442 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 SLCO1B3Q9NPD5 702 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 TIMMDC1Q9NPL8 285 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 AGPAT4Q9NRZ5 378 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 SIRT3Q9NTG7 399 aaPredicted RBP7.87□□□□□ -1.15
UBR1-204ENST00000563239 ACSS1Q9NUB1 689 aaPredicted RBP7.87□□□□□ -1.15
UBR1-204ENST00000563239 OLAHQ9NV23 265 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 NOP53Q9NZM5 478 aaKnown RBP7.87□□□□□ -1.15
UBR1-204ENST00000563239 SH3BP4Q9P0V3 963 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 NTMQ9P121 344 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 CNOT11Q9UKZ1 510 aaKnown RBP7.87□□□□□ -1.15
UBR1-204ENST00000563239 ERVK-11Q9UQG0 969 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 EIF3LQ9Y262 564 aaKnown RBP7.87□□□□□ -1.15
UBR1-204ENST00000563239 CHCHD2Q9Y6H1 151 aaPredicted RBP7.87□□□□□ -1.15
UBR1-204ENST00000563239 MYO9AB2RTY4 2548 aa7.87□□□□□ -1.15
UBR1-204ENST00000563239 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 GOLGA8QA0A0J9YX86 632 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 GOLGA8OA6NCC3 632 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 FRG2CA6NGY1 282 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 GOLGA8NF8WBI6 632 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 SCN2BO60939 215 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 VPS4BO75351 444 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 BCAS2O75934 225 aaPredicted RBP7.86□□□□□ -1.15
UBR1-204ENST00000563239 GLSO94925 669 aaPredicted RBP7.86□□□□□ -1.15
UBR1-204ENST00000563239 SLITRK5O94991 958 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 CRYABP02511 175 aaKnown RBP7.86□□□□□ -1.15
UBR1-204ENST00000563239 ABCB1P08183 1280 aaPredicted RBP7.86□□□□□ -1.15
UBR1-204ENST00000563239 EDN3P14138 238 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 LBPP18428 481 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 PRPS1L1P21108 318 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 CNR1P21554 472 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 ABCD3P28288 659 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 EPHA3P29320 983 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 NTSP30990 170 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 HPCAL1P37235 193 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 RFC3P40938 356 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 MAP3K8P41279 467 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 MEOX1P50221 254 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 WNT3P56703 355 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 FBXW4P57775 412 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 PHC1P78364 1004 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 HSPB3Q12988 150 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 MAD2L1Q13257 205 aaPredicted RBP7.86□□□□□ -1.15
UBR1-204ENST00000563239 MLC1Q15049 377 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 NNATQ16517 81 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 EXOSC6Q5RKV6 272 aaKnown RBP7.86□□□□□ -1.15
UBR1-204ENST00000563239 R3HCC1LQ7Z5L2 792 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms