RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 TEX26Q8N6G2 289 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 OR9G4Q8NGQ1 327 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 RNF141Q8WVD5 230 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 C22orf15Q8WYQ4 148 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 GLG1Q92896 1179 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 MARK4Q96L34 752 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 UBL7Q96S82 380 aaPredicted RBP4.47□□□□□ -1.69
SMG1-207ENST00000563235 PNKPQ96T60 521 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 PRMT1Q99873 361 aaKnown RBP4.47□□□□□ -1.69
SMG1-207ENST00000563235 ASPNQ9BXN1 380 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 FN3KQ9H479 309 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 PPP1R3EQ9H7J1 279 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 SPHK1Q9NYA1 384 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 RHCGQ9UBD6 479 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 SLC23A1Q9UHI7 598 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 USP22Q9UPT9 525 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 EXO1Q9UQ84 846 aaKnown RBP4.47□□□□□ -1.69
SMG1-207ENST00000563235 LRP12Q9Y561 859 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 PARP4Q9UKK3 1724 aaKnown RBP4.47□□□□□ -1.69
SMG1-207ENST00000563235 PAPPAQ13219 1627 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 F8W036 122 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 H3BN98 237 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 PDXKO00764 312 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 STX7O15400 261 aaKnown RBP4.47□□□□□ -1.69
SMG1-207ENST00000563235 ZSCAN12O43309 604 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 AQP9O43315 295 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 CLDN7O95471 211 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 APOC1P02654 83 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 RPN2P04844 631 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 CBSLP0DN79 551 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 NPR2P20594 1047 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 CHRNA5P30532 468 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 CBSP35520 551 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 MAGEA2P43356 314 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 MAGEA6P43360 314 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 COMPP49747 757 aaPredicted RBP4.47□□□□□ -1.69
SMG1-207ENST00000563235 ROM1Q03395 351 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 CHRNB3Q05901 458 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 NFATC3Q12968 1075 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 ARL6IP1Q15041 203 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 RNPS1Q15287 305 aaKnown RBP4.47□□□□□ -1.69
SMG1-207ENST00000563235 STXBP2Q15833 593 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 SOWAHAQ2M3V2 549 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 ZNF648Q5T619 568 aaPredicted RBP4.47□□□□□ -1.69
SMG1-207ENST00000563235 LIPKQ5VXJ0 399 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 FAM109BQ6ICB4 259 aaPredicted RBP4.47□□□□□ -1.69
SMG1-207ENST00000563235 VWA1Q6PCB0 445 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 FAM92BQ6ZTR7 304 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 SERPINA9Q86WD7 417 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 ERICH1Q86X53 443 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 LILRA3Q8N6C8 439 aaPredicted RBP4.47□□□□□ -1.69
SMG1-207ENST00000563235 LRRC75AQ8NAA5 344 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 GATSQ8NAP1 163 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 NOA1Q8NC60 698 aaKnown RBP4.47□□□□□ -1.69
SMG1-207ENST00000563235 NUP43Q8NFH3 380 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 LHFPL5Q8TAF8 219 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 PROKR1Q8TCW9 393 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 NETO1Q8TDF5 533 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 HAS1Q92839 578 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 MYDGFQ969H8 173 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 GTPBP3Q969Y2 492 aaKnown RBP4.47□□□□□ -1.69
SMG1-207ENST00000563235 COQ8BQ96D53 544 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 C12orf42Q96LP6 360 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 FANCD2OSQ96PS1 177 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 MAPKAP1Q9BPZ7 522 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 CENPKQ9BS16 269 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 LMF2Q9BU23 707 aaKnown RBP4.47□□□□□ -1.69
SMG1-207ENST00000563235 ZYG11BQ9C0D3 744 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 CAB39LQ9H9S4 337 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 FTSJ1Q9UET6 329 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 LRWD1Q9UFC0 647 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 UTYO14607 1347 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 NRXN3Q9Y4C0 1643 aa4.47□□□□□ -1.69
SMG1-207ENST00000563235 TBC1D3DA0A087WVF3 549 aa4.46□□□□□ -1.69
SMG1-207ENST00000563235 TBC1D3IA0A087WXS9 549 aa4.46□□□□□ -1.69
SMG1-207ENST00000563235 TBC1D3EA0A087X179 549 aa4.46□□□□□ -1.69
SMG1-207ENST00000563235 SLC5A10A0PJK1 596 aa4.46□□□□□ -1.69
SMG1-207ENST00000563235 CPED1A4D0V7 1026 aa4.46□□□□□ -1.69
SMG1-207ENST00000563235 TBC1D3BA6NDS4 549 aa4.46□□□□□ -1.69
SMG1-207ENST00000563235 NPEPPSL1A6NEC2 478 aa4.46□□□□□ -1.69
SMG1-207ENST00000563235 TBC1D3FA6NER0 549 aaPredicted RBP4.46□□□□□ -1.69
SMG1-207ENST00000563235 TBC1D3LB9A6J9 549 aa4.46□□□□□ -1.69
SMG1-207ENST00000563235 M0QZ24 198 aa4.46□□□□□ -1.69
SMG1-207ENST00000563235 SLC31A2O15432 143 aa4.46□□□□□ -1.69
SMG1-207ENST00000563235 DPM1O60762 260 aa4.46□□□□□ -1.69
SMG1-207ENST00000563235 SDC3O75056 442 aa4.46□□□□□ -1.69
SMG1-207ENST00000563235 SLC25A12O75746 678 aa4.46□□□□□ -1.69
SMG1-207ENST00000563235 GAPDHP04406 335 aaKnown RBP4.46□□□□□ -1.69
SMG1-207ENST00000563235 CHRM4P08173 479 aa4.46□□□□□ -1.69
SMG1-207ENST00000563235 TBC1D3HP0C7X1 549 aa4.46□□□□□ -1.69
SMG1-207ENST00000563235 SLC35E2BP0CK96 405 aa4.46□□□□□ -1.69
SMG1-207ENST00000563235 SLC35E2P0CK97 266 aa4.46□□□□□ -1.69
SMG1-207ENST00000563235 ME2P23368 584 aa4.46□□□□□ -1.69
SMG1-207ENST00000563235 DPP4P27487 766 aa4.46□□□□□ -1.69
SMG1-207ENST00000563235 TMED10P49755 219 aaKnown RBP4.46□□□□□ -1.69
SMG1-207ENST00000563235 CCL11P51671 97 aa4.46□□□□□ -1.69
SMG1-207ENST00000563235 VAV2P52735 878 aa4.46□□□□□ -1.69
SMG1-207ENST00000563235 PSMD4P55036 377 aaKnown RBP4.46□□□□□ -1.69
SMG1-207ENST00000563235 ELLP55199 621 aaPredicted RBP4.46□□□□□ -1.69
SMG1-207ENST00000563235 POLR2LP62875 67 aaKnown RBP4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms