RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 TXN2Q99757 166 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 TRIM51Q9BSJ1 452 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 DCTN5Q9BTE1 182 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 FICDQ9BVA6 458 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 PUS3Q9BZE2 481 aaKnown RBP2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 UPF3AQ9H1J1 476 aaKnown RBP2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 FAM124BQ9H5Z6 455 aaPredicted RBP2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 ALG9Q9H6U8 611 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 NDE1Q9NXR1 346 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 FZR1Q9UM11 496 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 DUSP12Q9UNI6 340 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 SMC3Q9UQE7 1217 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 RRP15Q9Y3B9 282 aaKnown RBP2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 RNF115Q9Y4L5 304 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 ATAD2BQ9ULI0 1458 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 A0A0J9YWU9 116 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 TRIM49BA6NDI0 452 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 ZSCAN5CA6NGD5 496 aaPredicted RBP2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 ZNF724A8MTY0 619 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 SOCS3O14543 225 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 CASKO14936 926 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 SDC3O75056 442 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 NXPH4O95158 308 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 KRT6BP04259 564 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 FCER2P06734 321 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 GSTA1P08263 222 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 OR9G9P0C7N8 305 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 THRBP10828 461 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 RPA2P15927 270 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 ADSSP30520 456 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 BRCC3P46736 316 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 KRT6CP48668 564 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 ACTR1AP61163 376 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 CNTN2Q02246 1040 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 KIAA0141Q14154 515 aaPredicted RBP2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 LY6DQ14210 128 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 MLF2Q15773 248 aaPredicted RBP2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 MAPK6Q16659 721 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 PARP6Q2NL67 630 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 ZNF699Q32M78 642 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 SLC36A3Q495N2 470 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 C2CD6Q53TS8 623 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 ZNF772Q68DY9 489 aaPredicted RBP2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 PMF1Q6P1K2 205 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 ADAMTSL5Q6ZMM2 481 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 ZDHHC21Q8IVQ6 265 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 EFCAB13Q8IY85 973 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 ZNF440Q8IYI8 595 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 FADS6Q8N9I5 356 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 OR1K1Q8NGR3 316 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 OR6F1Q8NGZ6 308 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 OR52J3Q8NH60 311 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 FBXO30Q8TB52 745 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 GOLGA5Q8TBA6 731 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 FBXO25Q8TCJ0 367 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 PNPT1Q8TCS8 783 aaKnown RBP2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 CHPT1Q8WUD6 406 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 PNPLA2Q96AD5 504 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 ZNF689Q96CS4 500 aaPredicted RBP2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 DHTKD1Q96HY7 919 aaPredicted RBP2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 PRICKLE1Q96MT3 831 aaPredicted RBP2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 ANKRD27Q96NW4 1050 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 AGAP3Q96P47 875 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 RBM4BQ9BQ04 359 aaKnown RBP2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 CRACR2AQ9BSW2 395 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 EDEM2Q9BV94 578 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 PINK1Q9BXM7 581 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 RPAP3Q9H6T3 665 aaPredicted RBP2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 GORASP2Q9H8Y8 452 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 WDR76Q9H967 626 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 SMPD3Q9NY59 655 aaPredicted RBP2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 THEGQ9P2T0 379 aa2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 ZNF490Q9ULM2 529 aaPredicted RBP2.69□□□□□ -1.98
SHCBP1-202ENST00000563219 AFF2P51816 1311 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 IGHV3-20A0A0C4DH32 117 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 A0A1B0GWJ7 208 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 GSAPA4D1B5 854 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 A8MUI8 341 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 EPM2AB3EWF7 344 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 K7EQM0 130 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 FBP2O00757 339 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 MCF2LO15068 1137 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 TNFSF12O43508 249 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 IDH3BO43837 385 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 CSDE1O75534 798 aaKnown RBP2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 OAS1P00973 400 aaKnown RBP2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 CSF2P04141 144 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 UCP1P25874 307 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 CALML3P27482 149 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 PTPN6P29350 595 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 MAT2AP31153 395 aaKnown RBP2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 CA8P35219 290 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 MAGEA5P43359 124 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 NDST1P52848 882 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 GBX2P52951 348 aaPredicted RBP2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 NAPAP54920 295 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 KRTAP10-3P60369 221 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms