RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 GXYLT1Q4G148 440 aa16.37■□□□□ 0.21
CMTM3-204ENST00000562357 WDR93Q6P2C0 686 aa16.37■□□□□ 0.21
CMTM3-204ENST00000562357 ZNF585AQ6P3V2 769 aa16.37■□□□□ 0.21
CMTM3-204ENST00000562357 NCCRP1Q6ZVX7 275 aaPredicted RBP16.37■□□□□ 0.21
CMTM3-204ENST00000562357 TRABD2AQ86V40 505 aa16.37■□□□□ 0.21
CMTM3-204ENST00000562357 OR5M9Q8NGP3 310 aa16.37■□□□□ 0.21
CMTM3-204ENST00000562357 OR9A2Q8NGT5 310 aa16.37■□□□□ 0.21
CMTM3-204ENST00000562357 CTHRC1Q96CG8 243 aa16.37■□□□□ 0.21
CMTM3-204ENST00000562357 METTL2AQ96IZ6 378 aaKnown RBP16.37■□□□□ 0.21
CMTM3-204ENST00000562357 RILPQ96NA2 401 aa16.37■□□□□ 0.21
CMTM3-204ENST00000562357 C12orf65Q9H3J6 166 aaKnown RBP16.37■□□□□ 0.21
CMTM3-204ENST00000562357 EML4Q9HC35 981 aaKnown RBP16.37■□□□□ 0.21
CMTM3-204ENST00000562357 FIS1Q9Y3D6 152 aa16.37■□□□□ 0.21
CMTM3-204ENST00000562357 LIPGQ9Y5X9 500 aa16.37■□□□□ 0.21
CMTM3-204ENST00000562357 GTF3C1Q12789 2109 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 LRRC3CA6NJW4 275 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 AZIN1O14977 448 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 SEC22BO75396 215 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 CBX7O95931 251 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 CELA3AP09093 270 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 NEFHP12036 1026 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 DRD5P21918 477 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 ACVR2AP27037 513 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 GRNP28799 593 aaKnown RBP16.36■□□□□ 0.21
CMTM3-204ENST00000562357 KRT20P35900 424 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 PPICP45877 212 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 DUSP2Q05923 314 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 PCLAFQ15004 111 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 TRMT12Q53H54 448 aaKnown RBP16.36■□□□□ 0.21
CMTM3-204ENST00000562357 ZNF628Q5EBL2 1059 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 IKBIPQ70UQ0 350 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 NUP54Q7Z3B4 507 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 BANPQ8N9N5 519 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 AENQ8WTP8 325 aaKnown RBP16.36■□□□□ 0.21
CMTM3-204ENST00000562357 CAVIN3Q969G5 261 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 OMA1Q96E52 524 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 C11orf24Q96F05 449 aaPredicted RBP16.36■□□□□ 0.21
CMTM3-204ENST00000562357 FAM111AQ96PZ2 611 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 STMN4Q9H169 189 aaPredicted RBP16.36■□□□□ 0.21
CMTM3-204ENST00000562357 ACKR4Q9NPB9 350 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 MYNNQ9NPC7 610 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 PNPLA3Q9NST1 481 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 LGALS13Q9UHV8 139 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 DTX4Q9Y2E6 619 aa16.36■□□□□ 0.21
CMTM3-204ENST00000562357 POLR3HQ9Y535 204 aaPredicted RBP16.36■□□□□ 0.21
CMTM3-204ENST00000562357 FRG2CA6NGY1 282 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 FAM47E-STBD1D6RA91 191 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 WDR1O75083 606 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 COQ9O75208 318 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 TRIM3O75382 744 aaPredicted RBP16.35■□□□□ 0.21
CMTM3-204ENST00000562357 TRAPPC6AO75865 159 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 SLITRK5O94991 958 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 ABCB1P08183 1280 aaPredicted RBP16.35■□□□□ 0.21
CMTM3-204ENST00000562357 ELAVL4P26378 380 aaKnown RBP16.35■□□□□ 0.21
CMTM3-204ENST00000562357 PTGER4P35408 488 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 GCKP35557 465 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 EMDP50402 254 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 NCBP2P52298 156 aaKnown RBP eCLIP16.35■□□□□ 0.21
CMTM3-204ENST00000562357 TOMM20Q15388 145 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 CLEC6AQ6EIG7 209 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 NOXRED1Q6NXP6 359 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 B3GNT6Q6ZMB0 384 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 TICAM1Q8IUC6 712 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 LURAP1LQ8IV03 231 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 KAT2AQ92830 837 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 DTNBP1Q96EV8 351 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 GATA5Q9BWX5 397 aaPredicted RBP16.35■□□□□ 0.21
CMTM3-204ENST00000562357 ANGPTL4Q9BY76 406 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 LRTM1Q9HBL6 345 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 PROK2Q9HC23 129 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 C1orf109Q9NX04 203 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 ALKBH4Q9NXW9 302 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 TAS2R9Q9NYW1 312 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 KLRF1Q9NZS2 232 aa16.35■□□□□ 0.21
CMTM3-204ENST00000562357 C15orf38-AP3S2A0A0A6YYH1 394 aa16.34■□□□□ 0.21
CMTM3-204ENST00000562357 ZNF500O60304 480 aaPredicted RBP16.34■□□□□ 0.21
CMTM3-204ENST00000562357 ABCB7O75027 752 aa16.34■□□□□ 0.21
CMTM3-204ENST00000562357 HOXD4P09016 255 aaPredicted RBP16.34■□□□□ 0.21
CMTM3-204ENST00000562357 RFPL3SP0C7P2 107 aa16.34■□□□□ 0.21
CMTM3-204ENST00000562357 GABRA1P14867 456 aa16.34■□□□□ 0.21
CMTM3-204ENST00000562357 CHRNB4P30926 498 aa16.34■□□□□ 0.21
CMTM3-204ENST00000562357 CASP3P42574 277 aa16.34■□□□□ 0.21
CMTM3-204ENST00000562357 PMPCAQ10713 525 aa16.34■□□□□ 0.21
CMTM3-204ENST00000562357 OR10Q1Q8NGQ4 319 aa16.34■□□□□ 0.21
CMTM3-204ENST00000562357 NEIL3Q8TAT5 605 aa16.34■□□□□ 0.21
CMTM3-204ENST00000562357 TMCO6Q96DC7 493 aa16.34■□□□□ 0.21
CMTM3-204ENST00000562357 TMEM41AQ96HV5 264 aa16.34■□□□□ 0.21
CMTM3-204ENST00000562357 OSBPL11Q9BXB4 747 aa16.34■□□□□ 0.21
CMTM3-204ENST00000562357 SLC6A15Q9H2J7 730 aa16.34■□□□□ 0.21
CMTM3-204ENST00000562357 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.34■□□□□ 0.21
CMTM3-204ENST00000562357 V9GYY5 206 aaPredicted RBP16.34■□□□□ 0.21
CMTM3-204ENST00000562357 PCNX1Q96RV3 2341 aa16.34■□□□□ 0.21
CMTM3-204ENST00000562357 TO15178 435 aa16.33■□□□□ 0.2
CMTM3-204ENST00000562357 NPHS1O60500 1241 aa16.33■□□□□ 0.2
CMTM3-204ENST00000562357 PLOD3O60568 738 aa16.33■□□□□ 0.2
CMTM3-204ENST00000562357 SPAG7O75391 227 aa16.33■□□□□ 0.2
CMTM3-204ENST00000562357 ERN1O75460 977 aaKnown RBP16.33■□□□□ 0.2
CMTM3-204ENST00000562357 REM1O75628 298 aa16.33■□□□□ 0.2
CMTM3-204ENST00000562357 JUNP05412 331 aaKnown RBP16.33■□□□□ 0.2
CMTM3-204ENST00000562357 DDX5P17844 614 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms