RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 FRG2CA6NGY1 282 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 UBDO15205 165 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 DIAPH2O60879 1101 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 COQ9O75208 318 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 NAGAP17050 411 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 DRD5P21918 477 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 PPICP45877 212 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 CDK9P50750 372 aaKnown RBP12.4□□□□□ -0.42
CDH1-204ENST00000562118 SSR4P51571 173 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 UFM1P61960 85 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 ARG2P78540 354 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 NFATC3Q12968 1075 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 NTRK2Q16620 822 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 C6orf163Q5TEZ5 329 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 TMEM81Q6P7N7 255 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 TMEM107Q6UX40 140 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 NPSR1Q6W5P4 371 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 ACAD11Q709F0 780 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 CATSPER1Q8NEC5 780 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 RFWD2Q8NHY2 731 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 SFXN5Q8TD22 340 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 HSPBAP1Q96EW2 488 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 UTP23Q9BRU9 249 aaKnown RBP12.4□□□□□ -0.42
CDH1-204ENST00000562118 LMF2Q9BU23 707 aaKnown RBP12.4□□□□□ -0.42
CDH1-204ENST00000562118 ITPAQ9BY32 194 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 DPY30Q9C005 99 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 SLC52A3Q9NQ40 469 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 FAM120CQ9NX05 1096 aaKnown RBP12.4□□□□□ -0.42
CDH1-204ENST00000562118 A0A1W2PRB8 838 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 TTC36A6NLP5 189 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 WWP2O00308 870 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 POLR3GO15318 223 aaPredicted RBP12.39□□□□□ -0.43
CDH1-204ENST00000562118 NME2P1O60361 137 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 OR6B1O95007 311 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 NME2P22392 152 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 SOX3P41225 446 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 KIR3DL1P43629 444 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 CYB561P49447 251 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 PSG6Q00889 435 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 HSPB3Q12988 150 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 OR1C1Q15619 314 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 SPANXN4Q5MJ08 99 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 ZNF324BQ6AW86 544 aaPredicted RBP12.39□□□□□ -0.43
CDH1-204ENST00000562118 OPN5Q6U736 354 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 MSANTD1Q6ZTZ1 278 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 TEX19Q8NA77 164 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 SLC22A8Q8TCC7 542 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 THAP3Q8WTV1 239 aaPredicted RBP12.39□□□□□ -0.43
CDH1-204ENST00000562118 SPACA9Q96E40 222 aaPredicted RBP12.39□□□□□ -0.43
CDH1-204ENST00000562118 FAM120BQ96EK7 910 aaKnown RBP12.39□□□□□ -0.43
CDH1-204ENST00000562118 LCORQ96JN0 433 aaPredicted RBP12.39□□□□□ -0.43
CDH1-204ENST00000562118 SGCZQ96LD1 299 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 CCDC115Q96NT0 180 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 NXF5Q9H1B4 397 aaKnown RBP12.39□□□□□ -0.43
CDH1-204ENST00000562118 ANKRA2Q9H9E1 313 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 LIN28AQ9H9Z2 209 aaKnown RBP12.39□□□□□ -0.43
CDH1-204ENST00000562118 FOLH1BQ9HBA9 442 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 FGFR1OP2Q9NVK5 253 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 GIN1Q9NXP7 522 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 TAS2R9Q9NYW1 312 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 LRFN1Q9P244 771 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 BTNL2Q9UIR0 455 aa12.39□□□□□ -0.43
CDH1-204ENST00000562118 CHCHD2Q9Y6H1 151 aaPredicted RBP12.39□□□□□ -0.43
CDH1-204ENST00000562118 PRSS51A0A1B0GVH4 220 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 PGRP06401 933 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 MANFP55145 182 aaKnown RBP12.38□□□□□ -0.43
CDH1-204ENST00000562118 HBA1P69905 142 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 LRRC74AQ0VAA2 488 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 RCAN2Q14206 197 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 FAM174BQ3ZCQ3 159 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 ANXA8L1Q5VT79 327 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 METTL21CQ5VZV1 264 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 AP1ARQ63HQ0 302 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 SPINK14Q6IE38 97 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 OR4F3Q6IEY1 312 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 ZCCHC12Q6PEW1 402 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 PTRH1Q86Y79 214 aaKnown RBP12.38□□□□□ -0.43
CDH1-204ENST00000562118 FUNDC1Q8IVP5 155 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 HORMAD2Q8N7B1 307 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 PAQR8Q8TEZ7 354 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 SLC35A4Q96G79 324 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 MS4A4EQ96PG1 132 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 SECISBP2Q96T21 854 aaKnown RBP12.38□□□□□ -0.43
CDH1-204ENST00000562118 EPN3Q9H201 632 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 CXorf36Q9H7Y0 433 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 NPHS2Q9NP85 383 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 SERHLQ9NQF3 203 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 GPATCH2Q9NW75 528 aa12.38□□□□□ -0.43
CDH1-204ENST00000562118 COPG1Q9Y678 874 aaKnown RBP12.38□□□□□ -0.43
CDH1-204ENST00000562118 ANKRD33BA6NCL7 494 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 ADAM10O14672 748 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 EMC8O43402 210 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 TSPAN2O60636 221 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 ERN1O75460 977 aaKnown RBP12.37□□□□□ -0.43
CDH1-204ENST00000562118 SLC25A12O75746 678 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 SLC22A3O75751 556 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 NKX2-2O95096 273 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 C6orf47O95873 294 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 IL6P05231 212 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 SP1P08047 785 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms