RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 HNMTP50135 292 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 LHX2P50458 406 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 ATP5J2P56134 94 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 GFRA1P56159 465 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 SRYQ05066 204 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 ZNF267Q14586 743 aaPredicted RBP8.98□□□□□ -0.97
TPM1-225ENST00000560679 ZNF460Q14592 562 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 TSNQ15631 228 aaKnown RBP8.98□□□□□ -0.97
TPM1-225ENST00000560679 FBXO48Q5FWF7 155 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 DESI1Q6ICB0 168 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 PLEKHM3Q6ZWE6 761 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 GALNT7Q86SF2 657 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 EXOC3L1Q86VI1 746 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 PACS2Q86VP3 889 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 PRR22Q8IZ63 422 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 ST13P4Q8IZP2 240 aaPredicted RBP8.98□□□□□ -0.97
TPM1-225ENST00000560679 TAGAPQ8N103 731 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 PDIK1LQ8N165 341 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 WDR34Q96EX3 536 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 ZC3HAV1LQ96H79 300 aaKnown RBP8.98□□□□□ -0.97
TPM1-225ENST00000560679 CCT8L2Q96SF2 557 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 EGFL8Q99944 293 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 FAM107BQ9H098 131 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 OPN3Q9H1Y3 402 aaPredicted RBP8.98□□□□□ -0.97
TPM1-225ENST00000560679 EHD1Q9H4M9 534 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 CCDC134Q9H6E4 229 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 GALNT9Q9HCQ5 603 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 PPANQ9NQ55 473 aaKnown RBP8.98□□□□□ -0.97
TPM1-225ENST00000560679 INTS9Q9NV88 658 aaKnown RBP8.98□□□□□ -0.97
TPM1-225ENST00000560679 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.98□□□□□ -0.97
TPM1-225ENST00000560679 HEY2Q9UBP5 337 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 CTNNAL1Q9UBT7 734 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 MEGF8Q7Z7M0 2845 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 A0A1W2PS29 197 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 OR6C76A6NM76 312 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 PLOD2O00469 737 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 DYRK3O43781 588 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 H2AFYO75367 372 aaKnown RBP8.97□□□□□ -0.97
TPM1-225ENST00000560679 SH3BGRLO75368 114 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 SMNDC1O75940 238 aaKnown RBP eCLIP8.97□□□□□ -0.97
TPM1-225ENST00000560679 PLAUP00749 431 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 THBDP07204 575 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 PGAM1P18669 254 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 DRD4P21917 467 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 GCAP28676 217 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 SSTR4P31391 388 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 SSR2P43308 183 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 SEC24CP53992 1094 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 CLDN18P56856 261 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 GPX6P59796 221 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 TNFRSF17Q02223 184 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 TGM3Q08188 693 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 FUT7Q11130 342 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 GAB1Q13480 694 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 VEZF1Q14119 521 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 DOC2AQ14183 400 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 CLEC12BQ2HXU8 276 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 MSS51Q4VC12 460 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 C18orf63Q68DL7 685 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 ANGPTL8Q6UXH0 198 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 BTLAQ7Z6A9 289 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 ANKMY2Q8IV38 441 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 FBXO36Q8NEA4 188 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 OR1J4Q8NGS1 313 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 PYROXD1Q8WU10 500 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 TMEM171Q8WVE6 324 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 ANKRD49Q8WVL7 239 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 ADIPOR1Q96A54 375 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 CHMP6Q96FZ7 201 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 VPS39Q96JC1 886 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 FAM111AQ96PZ2 611 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 TBCDQ9BTW9 1192 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 OR2B2Q9GZK3 357 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 ROGDIQ9GZN7 287 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 CXorf56Q9H5V9 222 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 ACSS3Q9H6R3 686 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 RPF2Q9H7B2 306 aaKnown RBP8.97□□□□□ -0.97
TPM1-225ENST00000560679 SERHLQ9NQF3 203 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 RYDENQ9NUL5 291 aaKnown RBP8.97□□□□□ -0.97
TPM1-225ENST00000560679 WWOXQ9NZC7 414 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 GPRC5BQ9NZH0 403 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 SENP1Q9P0U3 644 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 PSMC3IPQ9P2W1 217 aaPredicted RBP8.97□□□□□ -0.97
TPM1-225ENST00000560679 MAPRE3Q9UPY8 281 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 VWA7Q9Y334 891 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 SPACA6W5XKT8 324 aa8.97□□□□□ -0.97
TPM1-225ENST00000560679 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.97□□□□□ -0.971e-5■■■■□ 21.5
TPM1-225ENST00000560679 C2orf92A0A1B0GVN3 265 aa8.96□□□□□ -0.98
TPM1-225ENST00000560679 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.96□□□□□ -0.98
TPM1-225ENST00000560679 TMEM120BA0PK00 339 aa8.96□□□□□ -0.98
TPM1-225ENST00000560679 C2orf72A6NCS6 295 aa8.96□□□□□ -0.98
TPM1-225ENST00000560679 LRRC14BA6NHZ5 514 aa8.96□□□□□ -0.98
TPM1-225ENST00000560679 NCF1BA6NI72 391 aaPredicted RBP8.96□□□□□ -0.98
TPM1-225ENST00000560679 NCF1CA8MVU1 366 aaPredicted RBP8.96□□□□□ -0.98
TPM1-225ENST00000560679 B4DXG7 233 aa8.96□□□□□ -0.98
TPM1-225ENST00000560679 SAP18O00422 153 aaKnown RBP8.96□□□□□ -0.98
TPM1-225ENST00000560679 TAPBPO15533 448 aa8.96□□□□□ -0.98
TPM1-225ENST00000560679 TLX2O43763 284 aaPredicted RBP8.96□□□□□ -0.98
TPM1-225ENST00000560679 CGAP01215 116 aa8.96□□□□□ -0.98
TPM1-225ENST00000560679 CT62P0C5K7 136 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms