RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 SRSF11Q05519 484 aaKnown RBP12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 LRRC74AQ0VAA2 488 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 MGAT2Q10469 447 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 PTGR1Q14914 329 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 GSTA3Q16772 222 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 NADK2Q4G0N4 442 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 PIGGQ5H8A4 983 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 CPTPQ5TA50 214 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 PTRH1Q86Y79 214 aaKnown RBP12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 RIMKLAQ8IXN7 391 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 GOLM1Q8NBJ4 401 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 GLB1L3Q8NCI6 653 aaPredicted RBP12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 RBM15BQ8NDT2 890 aaKnown RBP12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 MDS2Q8NDY4 140 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 VPS37AQ8NEZ2 397 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 ASB15Q8WXK1 588 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 TESCQ96BS2 214 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 COQ8BQ96D53 544 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 HSPBAP1Q96EW2 488 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 C5orf34Q96MH7 638 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 RASL10BQ96S79 203 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 C1orf50Q9BV19 199 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 C1orf21Q9H246 121 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 HPF1Q9NWY4 346 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 BAIAP2L1Q9UHR4 511 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 PCDHGA10Q9Y5H3 936 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 TLN1Q9Y490 2541 aaKnown RBP12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 MYOCOSA0A1B0GUC4 107 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 A0A1W2PS29 197 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 GYG2O15488 501 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 OR2J2O76002 312 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 CLPSP04118 112 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 COX4I1P13073 169 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 NAGAP17050 411 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 SSTR4P31391 388 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 CD96P40200 585 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 CD97P48960 835 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 MANFP55145 182 aaKnown RBP12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 OR1C1Q15619 314 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 ZNF750Q32MQ0 723 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 TMEM198Q66K66 360 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 FCRLBQ6BAA4 426 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 PACS2Q86VP3 889 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 CYP4Z2PQ8N1L4 340 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 OR2L13Q8N349 312 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 ZNF321PQ8N8H1 164 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 ZNF441Q8N8Z8 693 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 OR8J2Q8NGG1 315 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 OR9A2Q8NGT5 310 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 C16orf52Q8NHV5 167 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 SCMH1Q96GD3 660 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 DPY30Q9C005 99 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 GLIPR2Q9H4G4 154 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 MRGBPQ9NV56 204 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 TMEM45AQ9NWC5 275 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 BCAP29Q9UHQ4 241 aa12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 C19orf53Q9UNZ5 99 aaPredicted RBP12.95□□□□□ -0.34
PKNOX1-209ENST00000560448 ATRXP46100 2492 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 HRKO00198 91 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 AKAP10O43572 662 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 PRKNO60260 465 aaPredicted RBP12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 NEURL1O76050 574 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 LRATO95237 230 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 CBX7O95931 251 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 CD1EP15812 388 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 DRD5P21918 477 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 GPX3P22352 226 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 GPC1P35052 558 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 PPICP45877 212 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 MRPL19P49406 292 aaKnown RBP12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 RPP38P78345 283 aaKnown RBP12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 PRR5P85299 388 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 PLEKHN1Q494U1 663 aaPredicted RBP12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 ZNF766Q5HY98 468 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 NXNQ6DKJ4 435 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 SLC25A25Q6KCM7 469 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 ZCCHC12Q6PEW1 402 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 RTL4Q6ZR62 310 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 ZNF605Q86T29 641 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 Q8NA96 180 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 FAM13CQ8NE31 585 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 OR52R1Q8NGF1 315 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 CLHC1Q8NHS4 586 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 PSMA8Q8TAA3 256 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 THAP3Q8WTV1 239 aaPredicted RBP12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 GFM2Q969S9 779 aaKnown RBP12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 ADIPOR1Q96A54 375 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 MOAP1Q96BY2 351 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 CMTM5Q96DZ9 223 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 ELP4Q96EB1 424 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 GAL3ST4Q96RP7 486 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 SECISBP2Q96T21 854 aaKnown RBP12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 MMADHCQ9H3L0 296 aaPredicted RBP12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 C3orf14Q9HBI5 128 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 TIMMDC1Q9NPL8 285 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 AGPAT4Q9NRZ5 378 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 DDX18Q9NVP1 670 aaKnown RBP12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 AIG1Q9NVV5 245 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 NTMQ9P121 344 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 GIMAP2Q9UG22 337 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms