RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 CT45A8P0DMV1 189 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 CT45A9P0DMV2 189 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 BMP2P12643 396 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 MTPNP58546 118 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 SLC26A5P58743 744 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 PSG6Q00889 435 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 EEF1A2Q05639 463 aaKnown RBP8.71□□□□□ -1.02
HERC1-206ENST00000559996 ART3Q13508 389 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 CEACAM7Q14002 265 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 CT45A2Q5DJT8 189 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 C6orf10Q5SRN2 563 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 ATP1A1-AS1Q5TC04 95 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 PAPD4Q6PIY7 484 aaKnown RBP8.71□□□□□ -1.02
HERC1-206ENST00000559996 WDR53Q7Z5U6 358 aaPredicted RBP8.71□□□□□ -1.02
HERC1-206ENST00000559996 NET1Q7Z628 596 aaPredicted RBP8.71□□□□□ -1.02
HERC1-206ENST00000559996 PTOV1Q86YD1 416 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 C9orf40Q8IXQ3 194 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 DEFB107AQ8IZN7 70 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 VWA5B2Q8N398 1253 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 IL22RA1Q8N6P7 574 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 HORMAD2Q8N7B1 307 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 ZNF441Q8N8Z8 693 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 SLC16A11Q8NCK7 471 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 B3GNT7Q8NFL0 401 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 OR8J3Q8NGG0 315 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 OR52N2Q8NGI0 321 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 OR1N1Q8NGS0 311 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 C16orf52Q8NHV5 167 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 SNIP1Q8TAD8 396 aaKnown RBP8.71□□□□□ -1.02
HERC1-206ENST00000559996 ELP5Q8TE02 316 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 METTL21AQ8WXB1 218 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 SLC35A4Q96G79 324 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 FBXL20Q96IG2 436 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 MAGED4Q96JG8 741 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 VSTM2LQ96N03 204 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 CDRT15Q96T59 188 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 GID8Q9NWU2 228 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 KCND3Q9UK17 655 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 VPS4AQ9UN37 437 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 PCDHGB4Q9UN71 923 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 SNX8Q9Y5X2 465 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 MED13Q9UHV7 2174 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 RNF103-CHMP3A0A140T963 221 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 SYNDIG1LA6NDD5 238 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 PRORSD1PA6NEY8 169 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 HMGN4O00479 90 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 GPR37O15354 613 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 NKX2-8O15522 239 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 ZNF354AO60765 605 aaPredicted RBP8.7□□□□□ -1.02
HERC1-206ENST00000559996 GCM2O75603 506 aaPredicted RBP8.7□□□□□ -1.02
HERC1-206ENST00000559996 ACP2P11117 423 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 ETFAP13804 333 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 TNNI3P19429 210 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 GPC1P35052 558 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 MNAT1P51948 309 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 PGDP52209 483 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 SLC7A2P52569 658 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 PRKAG1P54619 331 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 RPS26P62854 115 aaKnown RBP8.7□□□□□ -1.02
HERC1-206ENST00000559996 VAC14Q08AM6 782 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 FUT5Q11128 374 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 FXNQ16595 210 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 CRTC2Q53ET0 693 aaPredicted RBP8.7□□□□□ -1.02
HERC1-206ENST00000559996 PIGGQ5H8A4 983 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.7□□□□□ -1.02
HERC1-206ENST00000559996 PLAG1Q6DJT9 500 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 MFSD12Q6NUT3 480 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 H3F3CQ6NXT2 135 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 NPSR1Q6W5P4 371 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 CCDC121Q6ZUS5 278 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 NDUFAF7Q7L592 441 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 RNF130Q86XS8 419 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 KIF2BQ8N4N8 673 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 OR7G1Q8NGA0 311 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 OR10A6Q8NH74 314 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 OR14A16Q8NHC5 309 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 FAM110BQ8TC76 370 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 PNPT1Q8TCS8 783 aaKnown RBP8.7□□□□□ -1.02
HERC1-206ENST00000559996 PSMF1Q92530 271 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 DAZLQ92904 295 aaKnown RBP8.7□□□□□ -1.02
HERC1-206ENST00000559996 NCLNQ969V3 563 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 MOAP1Q96BY2 351 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 NAF1Q96HR8 494 aaKnown RBP8.7□□□□□ -1.02
HERC1-206ENST00000559996 CLPTM1LQ96KA5 538 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 LPAR4Q99677 370 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 YIPF4Q9BSR8 244 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 LMF2Q9BU23 707 aaKnown RBP8.7□□□□□ -1.02
HERC1-206ENST00000559996 OR8D2Q9GZM6 311 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 LRMDAQ9H2I8 198 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 GPN2Q9H9Y4 310 aaPredicted RBP8.7□□□□□ -1.02
HERC1-206ENST00000559996 FOLH1BQ9HBA9 442 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 ZCCHC3Q9NUD5 404 aaKnown RBP8.7□□□□□ -1.02
HERC1-206ENST00000559996 P4HTMQ9NXG6 502 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 GIN1Q9NXP7 522 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 PADI2Q9Y2J8 665 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 GPR55Q9Y2T6 319 aaPredicted RBP8.7□□□□□ -1.02
HERC1-206ENST00000559996 HEMK1Q9Y5R4 338 aaPredicted RBP8.7□□□□□ -1.02
HERC1-206ENST00000559996 CLCA3PQ9Y6N3 262 aa8.7□□□□□ -1.02
HERC1-206ENST00000559996 MAN1A2O60476 641 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 HNRNPCL1O60812 293 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms