RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 FCRL1Q96LA6 429 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 JSRP1Q96MG2 331 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 GLIPR2Q9H4G4 154 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 POLEQ07864 2286 aa13.65□□□□□ -0.22
RABGGTA-211ENST00000559850 FREM3P0C091 2139 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 MYO7BQ6PIF6 2116 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 A0A1B0GUH1 482 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 WIPF3A6NGB9 483 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 NPIPB8E9PQR5 432 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 TM9SF1O15321 606 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 GLSO94925 669 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 SERPINE1P05121 402 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 RFPL3SP0C7P2 107 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 MYZAPP0CAP1 466 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 BCKDHAP12694 445 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 ABOP16442 354 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 COL8A1P27658 744 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 ABCD3P28288 659 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 SERPINB5P36952 375 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 MC3RP41968 323 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 MAGEA5P43359 124 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 GSTM5P46439 218 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 CORO7P57737 925 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 CEBPEQ15744 281 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 PDCD2Q16342 344 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 XKR7Q5GH72 579 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 GK5Q6ZS86 529 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 RNF165Q6ZSG1 346 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 ZNF551Q7Z340 670 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 WDR53Q7Z5U6 358 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 SPPL2CQ8IUH8 684 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 GHDCQ8N2G8 530 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 FBXW8Q8N3Y1 598 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 DIO2Q92813 273 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 OMA1Q96E52 524 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 LCORQ96JN0 433 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 IL1RL2Q9HB29 575 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 TNFRSF10DQ9UBN6 386 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 ZNF835Q9Y2P0 537 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 ICE1Q9Y2F5 2266 aa13.64□□□□□ -0.23
RABGGTA-211ENST00000559850 DIDO1Q9BTC0 2240 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 ZNF407Q9C0G0 2248 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 TMEM120BA0PK00 339 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 C2orf72A6NCS6 295 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 LRRC3CA6NJW4 275 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 ACOT7O00154 380 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 BIRC5O15392 142 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 ZWINTO95229 277 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 MPIP34949 423 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 NRG3P56975 720 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 WDR4P57081 412 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 ABCE1P61221 599 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 PLCXD2Q0VAA5 305 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 HSPB3Q12988 150 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 RPS6KA2Q15349 733 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 NPSR1Q6W5P4 371 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 IKBIPQ70UQ0 350 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 LIX1Q8N485 282 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 SPPL2AQ8TCT8 520 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 RELTQ969Z4 430 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 CCDC120Q96HB5 630 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 AMDHD1Q96NU7 426 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 NODALQ96S42 347 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 SORT1Q99523 831 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 CCT7Q99832 543 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 REEP4Q9H6H4 257 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 FOLH1BQ9HBA9 442 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 TMBIM4Q9HC24 238 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 PLEKHB1Q9UF11 243 aaPredicted RBP13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 PRODH2Q9UF12 536 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 ACTL7BQ9Y614 415 aa13.63□□□□□ -0.23
RABGGTA-211ENST00000559850 USP9YO00507 2555 aaPredicted RBP13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 PDPK1O15530 556 aa13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 PPM1BO75688 479 aa13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 TPOP07202 933 aa13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 ABCB1P08183 1280 aaPredicted RBP13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 DRD5P21918 477 aa13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 NTSP30990 170 aa13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 PTGS2P35354 604 aa13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 SLC1A6P48664 564 aa13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 PER3P56645 1201 aa13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 MAGOHP61326 146 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 ZNF155Q12901 538 aaPredicted RBP13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 CASP8Q14790 479 aa13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 PTGR1Q14914 329 aa13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 C6orf136Q5SQH8 315 aa13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 HHATQ5VTY9 493 aa13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 CROCCP2Q86T23 111 aa13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 SLC22A16Q86VW1 577 aa13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 DOLPP1Q86YN1 238 aa13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 DND1Q8IYX4 353 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 SAMD14Q8IZD0 417 aaPredicted RBP13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 FAM109AQ8N4B1 249 aa13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 OR4N2Q8NGD1 307 aa13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 TMBIM1Q969X1 311 aa13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 PPCDCQ96CD2 204 aa13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 TUBGCP3Q96CW5 907 aa13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 METTL2AQ96IZ6 378 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-211ENST00000559850 PPP3R2Q96LZ3 170 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms